DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LDTPKTT
Uniprot ID:
Q5T6F2
Source protein:
Ubiquitin-associated protein 2
Source gene:
UBAP2
Class:
DEG_SCF_FBW7_1
Location:
655:661
E3 ligase:
FBXW7
DEGRON score:
0.9727
ASA_SCORE:
103.7429
COIL:
0.9683
CONS_SCORE:
0.4042
DSS_SCORE:
0.8075
HELIX:
0.0103
FCONS_SCORE:
0.9253
RIG_SCORE:
0.636
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S665F
TCGA-77-A5G3
LUSC
TCGA
LDTPKTT
DEG_SCF_FBW7_1
0.6667
p.S665F
DO45456
LUSC
ICGC
LDTPKTT
DEG_SCF_FBW7_1
0.6667
p.R650Q
TCGA-A5-A2K5
UCEC
TCGA
LDTPKTT
DEG_SCF_FBW7_1
0.1944
p.R650Q
TCGA-EI-6917
READ
TCGA
LDTPKTT
DEG_SCF_FBW7_1
0.1944
p.R650Q
DO36881
READ
ICGC
LDTPKTT
DEG_SCF_FBW7_1
0.1944
p.R650Q
DO41379
UCEC
ICGC
LDTPKTT
DEG_SCF_FBW7_1
0.1944
p.K659N
TCGA-AA-A00N
COAD
TCGA
LDTPKTT
DEG_SCF_FBW7_1
0.5806
p.K659N
TCGA-EO-A22R
UCEC
TCGA
LDTPKTT
DEG_SCF_FBW7_1
0.5806
p.K659N
DO9876
COAD
ICGC
LDTPKTT
DEG_SCF_FBW7_1
0.5806
p.K659N
DO42713
UCEC
ICGC
LDTPKTT
DEG_SCF_FBW7_1
0.5806
p.Q653H
TCGA-E5-A4U1
BLCA
TCGA
LDTPKTT
DEG_SCF_FBW7_1
0.2778
p.Q653H
DO44061
BLCA
ICGC
LDTPKTT
DEG_SCF_FBW7_1
0.2778
p.Q653K
DO228929
LICA
ICGC
LDTPKTT
DEG_SCF_FBW7_1
0.2778
p.P671H
DO229019
LICA
ICGC
LDTPKTT
DEG_SCF_FBW7_1
0.0556
p.P667Q
DO229028
LICA
ICGC
LDTPKTT
DEG_SCF_FBW7_1
0.1667
p.A666D
DO229045
LICA
ICGC
LDTPKTT
DEG_SCF_FBW7_1
0.1944
p.R670Q
DO43306
UCEC
ICGC
LDTPKTT
DEG_SCF_FBW7_1
0.0833
p.G662S
SIDM00565
Oral Cavity Carcinoma
GDSC
LDTPKTT
DEG_SCF_FBW7_1
0.3056
p.G662S
ACH-001626
Head and Neck Cancer
CCLE
LDTPKTT
DEG_SCF_FBW7_1
0.3056
p.G662S
OSC-20
upper_aerodigestive_tract
COSMIC
LDTPKTT
DEG_SCF_FBW7_1
0.3056
p.L667I
SIDM01117
Small Cell Lung Carcinoma
GDSC
LDTPKTT
DEG_SCF_FBW7_1
0.1667
p.L667I
SIDM00954
Breast Carcinoma
GDSC
LDTPKTT
DEG_SCF_FBW7_1
0.1667
p.L667I
SIDM01677
Non-Small Cell Lung Carcinoma
GDSC
LDTPKTT
DEG_SCF_FBW7_1
0.1667
Drug responses associated with UBAP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LDTPKTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5T6F2
Ubiquitin-associated protein 2
DEG_SCF_FBW7_1
655:661
LDTPKTT
FBXW7
0.9727
More...