DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LEIFGE
Uniprot ID:
A8MT33
Source protein:
Synaptonemal complex central element protein 1-like
Source gene:
SYCE1L
Class:
LIG_APCC_ABBA_1
Location:
199:204
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5332
ASA_SCORE:
76.8
COIL:
0.1847
CONS_SCORE:
0.471
DSS_SCORE:
0.4702
HELIX:
0.8042
FCONS_SCORE:
1.0026
RIG_SCORE:
0.7886
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G194E
TCGA-CK-4951
COAD
TCGA
LEIFGE
LIG_APCC_ABBA_1
0.1944
p.G194E
DO10582
COAD
ICGC
LEIFGE
LIG_APCC_ABBA_1
0.1944
p.G194E
DO47911
STAD
ICGC
LEIFGE
LIG_APCC_ABBA_1
0.1944
p.P210T
DO229005
COCA
ICGC
LEIFGE
LIG_APCC_ABBA_1
0.1667
p.P210T
DO231102
LUSC
ICGC
LEIFGE
LIG_APCC_ABBA_1
0.1667
p.P210T
DO231149
LUSC
ICGC
LEIFGE
LIG_APCC_ABBA_1
0.1667
p.R207L
DO229022
LICA
ICGC
LEIFGE
LIG_APCC_ABBA_1
0.25
p.A209S
DO229032
LICA
ICGC
LEIFGE
LIG_APCC_ABBA_1
0.1944
p.A214S
DO229006
LICA
ICGC
LEIFGE
LIG_APCC_ABBA_1
0.0556
Drug responses associated with SYCE1L mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LEIFGE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A8MT33
Synaptonemal complex central element protein 1-like
LIG_APCC_ABBA_1
199:204
LEIFGE
APC,CDC20,FZR1
0.5332
More...