DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LGTPKGS
Uniprot ID:
A2RU54
Source protein:
Homeobox protein HMX2
Source gene:
HMX2
Class:
DEG_SCF_FBW7_1
Location:
89:95
E3 ligase:
FBXW7
DEGRON score:
0.9971
ASA_SCORE:
80.2429
COIL:
0.9357
CONS_SCORE:
0.4348
DSS_SCORE:
0.6265
HELIX:
0.023
FCONS_SCORE:
1.2239
RIG_SCORE:
0.5542
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.F86L
TCGA-61-2012
OV
TCGA
LGTPKGS
DEG_SCF_FBW7_1
0.25
p.F86L
DO32536
OV
ICGC
LGTPKGS
DEG_SCF_FBW7_1
0.25
p.G96R
TCGA-91-A4BC
LUAD
TCGA
LGTPKGS
DEG_SCF_FBW7_1
0.3056
p.G96R
DO45422
LUAD
ICGC
LGTPKGS
DEG_SCF_FBW7_1
0.3056
p.P87S
TCGA-FR-A3YO
SKCM
TCGA
LGTPKGS
DEG_SCF_FBW7_1
0.2778
p.P87S
DO37419
SKCM
ICGC
LGTPKGS
DEG_SCF_FBW7_1
0.2778
p.P87H
TCGA-GN-A26A
SKCM
TCGA
LGTPKGS
DEG_SCF_FBW7_1
0.2778
p.P87H
DO37861
SKCM
ICGC
LGTPKGS
DEG_SCF_FBW7_1
0.2778
p.K93E
TCGA-IB-7651
PAAD
TCGA
LGTPKGS
DEG_SCF_FBW7_1
0.591
p.K93E
DO46657
PAAD
ICGC
LGTPKGS
DEG_SCF_FBW7_1
0.591
p.G97R
TCGA-RU-A8FL
COAD
TCGA
LGTPKGS
DEG_SCF_FBW7_1
0.2778
p.G97R
DO51733
COAD
ICGC
LGTPKGS
DEG_SCF_FBW7_1
0.2778
p.S95N
SIDM00660
Colorectal Carcinoma
GDSC
LGTPKGS
DEG_SCF_FBW7_1
0.7069
p.S95N
ACH-000985
Colon/Colorectal Cancer
CCLE
LGTPKGS
DEG_SCF_FBW7_1
0.7069
p.S95N
LS-411N
large_intestine
COSMIC
LGTPKGS
DEG_SCF_FBW7_1
0.7069
p.E104K
SIDM00879
Breast Carcinoma
GDSC
LGTPKGS
DEG_SCF_FBW7_1
0.0833
p.E104K
SIDM00930
Osteosarcoma
GDSC
LGTPKGS
DEG_SCF_FBW7_1
0.0833
p.R105C
SIDM01180
Hepatocellular Carcinoma
GDSC
LGTPKGS
DEG_SCF_FBW7_1
0.0556
p.R105C
SIDM00170
Head and Neck Carcinoma
GDSC
LGTPKGS
DEG_SCF_FBW7_1
0.0556
p.R105C
SNU-387
liver
COSMIC
LGTPKGS
DEG_SCF_FBW7_1
0.0556
p.P92R
ACH-001540
Liposarcoma
CCLE
LGTPKGS
DEG_SCF_FBW7_1
0.7512
p.P92S
ACH-001687
Kidney Cancer
CCLE
LGTPKGS
DEG_SCF_FBW7_1
0.6752
Drug responses associated with HMX2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LGTPKGS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A2RU54
Homeobox protein HMX2
DEG_SCF_FBW7_1
89:95
LGTPKGS
FBXW7
0.9971
More...