DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LKFTPTET
Uniprot ID:
P02748
Source protein:
Complement component C9 [Cleaved into: Complement component C9a; Complement component C9b]
Source gene:
C9
Class:
DEG_SCF_FBW7_1
Location:
241:248
E3 ligase:
FBXW7
DEGRON score:
0.9801
ASA_SCORE:
60.65
COIL:
0.5755
CONS_SCORE:
0.5038
DSS_SCORE:
0.3418
HELIX:
0.0946
FCONS_SCORE:
1.488
RIG_SCORE:
0.7865
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P245T
TCGA-55-6970
LUAD
TCGA
LKFTPTET
DEG_SCF_FBW7_1
0.7031
p.P245T
DO24421
LUAD
ICGC
LKFTPTET
DEG_SCF_FBW7_1
0.7031
p.N236H
TCGA-A2-A0EW
BRCA
TCGA
LKFTPTET
DEG_SCF_FBW7_1
0.1944
p.N236H
DO1481
BRCA
ICGC
LKFTPTET
DEG_SCF_FBW7_1
0.1944
p.N234H
TCGA-AA-3984
COAD
TCGA
LKFTPTET
DEG_SCF_FBW7_1
0.1389
p.N234H
TCGA-D1-A17Q
UCEC
TCGA
LKFTPTET
DEG_SCF_FBW7_1
0.1389
p.N234H
DO9002
COAD
ICGC
LKFTPTET
DEG_SCF_FBW7_1
0.1389
p.N234H
DO41903
UCEC
ICGC
LKFTPTET
DEG_SCF_FBW7_1
0.1389
p.S240Y
TCGA-B5-A0JY
UCEC
TCGA
LKFTPTET
DEG_SCF_FBW7_1
0.3056
p.S240Y
DO43041
UCEC
ICGC
LKFTPTET
DEG_SCF_FBW7_1
0.3056
p.N234K
TCGA-BS-A0UF
UCEC
TCGA
LKFTPTET
DEG_SCF_FBW7_1
0.1389
p.N234K
DO41488
UCEC
ICGC
LKFTPTET
DEG_SCF_FBW7_1
0.1389
p.K242N
TCGA-CA-6717
COAD
TCGA
LKFTPTET
DEG_SCF_FBW7_1
0.5806
p.K242N
DO8264
COAD
ICGC
LKFTPTET
DEG_SCF_FBW7_1
0.5806
p.E257K
TCGA-EE-A3AE
SKCM
TCGA
LKFTPTET
DEG_SCF_FBW7_1
0.0833
p.E257K
DO222644
MELA
ICGC
LKFTPTET
DEG_SCF_FBW7_1
0.0833
p.E257K
DO37802
SKCM
ICGC
LKFTPTET
DEG_SCF_FBW7_1
0.0833
p.T246I
SIDM00660
Colorectal Carcinoma
GDSC
LKFTPTET
DEG_SCF_FBW7_1
0.5966
p.T246I
ACH-000985
Colon/Colorectal Cancer
CCLE
LKFTPTET
DEG_SCF_FBW7_1
0.5966
p.T246I
LS-411N
large_intestine
COSMIC
LKFTPTET
DEG_SCF_FBW7_1
0.5966
Drug responses associated with C9 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKFTPTET
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P02748
Complement component C9 [Cleaved into: Complement component C9a; Complement component C9b]
DEG_SCF_FBW7_1
241:248
LKFTPTET
FBXW7
0.9801
More...