DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
LKLHTD
Uniprot ID:
Q13114
Source protein:
TNF receptor-associated factor 3
Source gene:
TRAF3
Class:
LIG_APCC_ABBA_1
Location:
19:24
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9473
ASA_SCORE:
106.6667
COIL:
0.895
CONS_SCORE:
0.5206
DSS_SCORE:
0.6398
HELIX:
0.0795
FCONS_SCORE:
0.9869
RIG_SCORE:
0.6954
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q14P
TCGA-23-2649
OV
TCGA
LKLHTD
LIG_APCC_ABBA_1
0.1944
p.Q14P
DO31779
OV
ICGC
LKLHTD
LIG_APCC_ABBA_1
0.1944
p.R25L
TCGA-AA-3947
COAD
TCGA
LKLHTD
LIG_APCC_ABBA_1
0.3056
p.R25L
DO8192
COAD
ICGC
LKLHTD
LIG_APCC_ABBA_1
0.3056
p.P18L
TCGA-AJ-A3OK
UCEC
TCGA
LKLHTD
LIG_APCC_ABBA_1
0.3056
p.P18L
DO43602
UCEC
ICGC
LKLHTD
LIG_APCC_ABBA_1
0.3056
p.T29M
TCGA-B5-A3FC
UCEC
TCGA
LKLHTD
LIG_APCC_ABBA_1
0.6389
p.T29M
TCGA-DU-6392
LGG
TCGA
LKLHTD
LIG_APCC_ABBA_1
0.6389
p.T29M
DO22237
LGG
ICGC
LKLHTD
LIG_APCC_ABBA_1
0.6389
p.T29M
DO41871
UCEC
ICGC
LKLHTD
LIG_APCC_ABBA_1
0.6389
p.S9F
TCGA-C5-A1MK
CESC
TCGA
LKLHTD
LIG_APCC_ABBA_1
0.5
p.S9F
TCGA-JW-A5VL
CESC
TCGA
LKLHTD
LIG_APCC_ABBA_1
0.5
p.S9F
DO49976
CESC
ICGC
LKLHTD
LIG_APCC_ABBA_1
0.5
p.S9F
DO6290
CESC
ICGC
LKLHTD
LIG_APCC_ABBA_1
0.5
p.P34T
TCGA-EE-A181
SKCM
TCGA
LKLHTD
LIG_APCC_ABBA_1
0.0556
p.P34T
DO37444
SKCM
ICGC
LKLHTD
LIG_APCC_ABBA_1
0.0556
p.P34S
TCGA-EE-A3AE
SKCM
TCGA
LKLHTD
LIG_APCC_ABBA_1
0.0556
p.P34S
DO37802
SKCM
ICGC
LKLHTD
LIG_APCC_ABBA_1
0.0556
p.T29P
DO222427
BTCA
ICGC
LKLHTD
LIG_APCC_ABBA_1
0.6389
p.A12T
SIDM01118
Small Cell Lung Carcinoma
GDSC
LKLHTD
LIG_APCC_ABBA_1
0.1389
p.A12T
SIDM01159
Other Sarcomas
GDSC
LKLHTD
LIG_APCC_ABBA_1
0.1389
p.A12T
SW872
soft_tissue
COSMIC
LKLHTD
LIG_APCC_ABBA_1
0.1389
p.A12T
NCI-H740
lung
COSMIC
LKLHTD
LIG_APCC_ABBA_1
0.1389
p.A27P
SIDM00316
Glioblastoma
GDSC
LKLHTD
LIG_APCC_ABBA_1
0.25
p.A27P
ACH-000469
Brain Cancer
CCLE
LKLHTD
LIG_APCC_ABBA_1
0.25
p.A27P
YH-13
central_nervous_system
COSMIC
LKLHTD
LIG_APCC_ABBA_1
0.25
Drug responses associated with TRAF3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKLHTD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13114
TNF receptor-associated factor 3
LIG_APCC_ABBA_1
19:24
LKLHTD
APC,CDC20,FZR1
0.9473
More...