DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LKPFTE
Uniprot ID:
P40189
Source protein:
Interleukin-6 receptor subunit beta
Source gene:
IL6ST
Class:
LIG_APCC_ABBA_1
Location:
289:294
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8849
ASA_SCORE:
52.7667
COIL:
0.7208
CONS_SCORE:
0.7295
DSS_SCORE:
0.1668
HELIX:
0.0197
FCONS_SCORE:
1.311
RIG_SCORE:
0.8728
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S279C
TCGA-BH-A0WA
BRCA
TCGA
LKPFTE
LIG_APCC_ABBA_1
0.0556
p.S279C
DO2897
BRCA
ICGC
LKPFTE
LIG_APCC_ABBA_1
0.0556
p.R281Q
TCGA-EO-A3AV
UCEC
TCGA
LKPFTE
LIG_APCC_ABBA_1
0.1111
p.R281Q
DO52412
UCEC
ICGC
LKPFTE
LIG_APCC_ABBA_1
0.1111
p.S279F
TCGA-ER-A19E
SKCM
TCGA
LKPFTE
LIG_APCC_ABBA_1
0.0556
p.S279F
TCGA-ZF-AA58
BLCA
TCGA
LKPFTE
LIG_APCC_ABBA_1
0.0556
p.S279F
DO219100
BLCA
ICGC
LKPFTE
LIG_APCC_ABBA_1
0.0556
p.S279F
DO47542
SKCM
ICGC
LKPFTE
LIG_APCC_ABBA_1
0.0556
p.R300H
TCGA-QK-A8ZB
HNSC
TCGA
LKPFTE
LIG_APCC_ABBA_1
0.1667
p.R300H
DO52100
HNSC
ICGC
LKPFTE
LIG_APCC_ABBA_1
0.1667
p.S282F
DO222504
MELA
ICGC
LKPFTE
LIG_APCC_ABBA_1
0.1389
Drug responses associated with IL6ST mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKPFTE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P40189
Interleukin-6 receptor subunit beta
LIG_APCC_ABBA_1
289:294
LKPFTE
APC,CDC20,FZR1
0.8849
More...