DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LKPHPE
Uniprot ID:
P54646
Source protein:
5'-AMP-activated protein kinase catalytic subunit alpha-2
Source gene:
PRKAA2
Class:
LIG_APCC_ABBA_1
Location:
363:368
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9332
ASA_SCORE:
105.8667
COIL:
0.9675
CONS_SCORE:
0.2514
DSS_SCORE:
0.6263
HELIX:
0.015
FCONS_SCORE:
1.1265
RIG_SCORE:
0.5938
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D354Y
TCGA-55-8208
LUAD
TCGA
LKPHPE
LIG_APCC_ABBA_1
0.0833
p.D354Y
DO51192
LUAD
ICGC
LKPHPE
LIG_APCC_ABBA_1
0.0833
p.R369M
TCGA-AA-3858
COAD
TCGA
LKPHPE
LIG_APCC_ABBA_1
0.3056
p.R369M
DO10308
COAD
ICGC
LKPHPE
LIG_APCC_ABBA_1
0.3056
p.S377I
TCGA-AP-A051
UCEC
TCGA
LKPHPE
LIG_APCC_ABBA_1
0.5278
p.S377I
DO42673
UCEC
ICGC
LKPHPE
LIG_APCC_ABBA_1
0.5278
p.P361T
TCGA-BR-4361
STAD
TCGA
LKPHPE
LIG_APCC_ABBA_1
0.2778
p.P361T
DO38887
STAD
ICGC
LKPHPE
LIG_APCC_ABBA_1
0.2778
p.H358Y
TCGA-BR-8680
STAD
TCGA
LKPHPE
LIG_APCC_ABBA_1
0.1944
p.H358Y
DO47769
STAD
ICGC
LKPHPE
LIG_APCC_ABBA_1
0.1944
p.S377N
TCGA-DA-A1I1
SKCM
TCGA
LKPHPE
LIG_APCC_ABBA_1
0.5278
p.S377N
DO37966
SKCM
ICGC
LKPHPE
LIG_APCC_ABBA_1
0.5278
p.P367T
TCGA-DK-A3IL
BLCA
TCGA
LKPHPE
LIG_APCC_ABBA_1
0.5919
p.P367T
DO555
BLCA
ICGC
LKPHPE
LIG_APCC_ABBA_1
0.5919
p.H366Y
TCGA-EB-A5SG
SKCM
TCGA
LKPHPE
LIG_APCC_ABBA_1
0.6118
p.H366Y
DO48726
SKCM
ICGC
LKPHPE
LIG_APCC_ABBA_1
0.6118
p.P367L
TCGA-EB-A5UL
SKCM
TCGA
LKPHPE
LIG_APCC_ABBA_1
0.6471
p.P367L
DO47601
SKCM
ICGC
LKPHPE
LIG_APCC_ABBA_1
0.6471
p.E368Q
TCGA-FD-A43X
BLCA
TCGA
LKPHPE
LIG_APCC_ABBA_1
0.6744
p.E368Q
DO44067
BLCA
ICGC
LKPHPE
LIG_APCC_ABBA_1
0.6744
p.P378H
TCGA-FS-A1ZP
SKCM
TCGA
LKPHPE
LIG_APCC_ABBA_1
0.0556
p.P378H
DO37703
SKCM
ICGC
LKPHPE
LIG_APCC_ABBA_1
0.0556
p.L363P
TCGA-VQ-A92D
STAD
TCGA
LKPHPE
LIG_APCC_ABBA_1
0.7582
p.L363P
DO222366
STAD
ICGC
LKPHPE
LIG_APCC_ABBA_1
0.7582
p.A356V
TCGA-XK-AAIW
PRAD
TCGA
LKPHPE
LIG_APCC_ABBA_1
0.1389
p.A356V
DO51407
PRAD
ICGC
LKPHPE
LIG_APCC_ABBA_1
0.1389
p.D354N
DO229491
SKCA
ICGC
LKPHPE
LIG_APCC_ABBA_1
0.0833
p.P371T
SIDM00885
Breast Carcinoma
GDSC
LKPHPE
LIG_APCC_ABBA_1
0.25
p.P371T
ACH-000111
Breast Cancer
CCLE
LKPHPE
LIG_APCC_ABBA_1
0.25
p.P371T
HCC1187
breast
COSMIC
LKPHPE
LIG_APCC_ABBA_1
0.25
p.R369S
SIDM00138
Non-Small Cell Lung Carcinoma
GDSC
LKPHPE
LIG_APCC_ABBA_1
0.3056
p.R369S
ACH-000900
Lung Cancer
CCLE
LKPHPE
LIG_APCC_ABBA_1
0.3056
p.R369S
NCI-H23
lung
COSMIC
LKPHPE
LIG_APCC_ABBA_1
0.3056
p.P378L
ACH-002396
Bone Cancer
CCLE
LKPHPE
LIG_APCC_ABBA_1
0.0556
p.P378L
Sarc9371
bone
COSMIC
LKPHPE
LIG_APCC_ABBA_1
0.0556
Drug responses associated with PRKAA2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LKPHPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P54646
5'-AMP-activated protein kinase catalytic subunit alpha-2
LIG_APCC_ABBA_1
363:368
LKPHPE
APC,CDC20,FZR1
0.9332
More...