DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LNVYGD
Uniprot ID:
Q92643
Source protein:
GPI-anchor transamidase
Source gene:
PIGK
Class:
LIG_APCC_ABBA_1
Location:
110:115
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6614
ASA_SCORE:
54.6167
COIL:
0.6262
CONS_SCORE:
0.6025
DSS_SCORE:
0.2362
HELIX:
0.1967
FCONS_SCORE:
1.3518
RIG_SCORE:
0.7879
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V102L
TCGA-06-5416
GBM
TCGA
LNVYGD
LIG_APCC_ABBA_1
0.1111
p.V102L
DO10880
GBM
ICGC
LNVYGD
LIG_APCC_ABBA_1
0.1111
p.E118D
TCGA-AX-A0J0
UCEC
TCGA
LNVYGD
LIG_APCC_ABBA_1
0.25
p.E118D
DO41133
UCEC
ICGC
LNVYGD
LIG_APCC_ABBA_1
0.25
p.N111I
DO230974
LUSC
ICGC
LNVYGD
LIG_APCC_ABBA_1
0.6169
p.N111I
DO224632
LUSC
ICGC
LNVYGD
LIG_APCC_ABBA_1
0.6169
p.E125K
SIDM00955
Melanoma
GDSC
LNVYGD
LIG_APCC_ABBA_1
0.0556
p.E125K
ACH-000812
Skin Cancer
CCLE
LNVYGD
LIG_APCC_ABBA_1
0.0556
p.E125K
ACH-001001
Bone Cancer
CCLE
LNVYGD
LIG_APCC_ABBA_1
0.0556
p.E125K
COLO-783
skin
COSMIC
LNVYGD
LIG_APCC_ABBA_1
0.0556
Drug responses associated with PIGK mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LNVYGD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q92643
GPI-anchor transamidase
LIG_APCC_ABBA_1
110:115
LNVYGD
APC,CDC20,FZR1
0.6614
More...