DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LPLATVSPG
Uniprot ID:
Q13938
Source protein:
Calcyphosin
Source gene:
CAPS
Class:
DEG_SIAH_1
Location:
52:60
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.9917
ASA_SCORE:
72.5333
COIL:
0.8767
CONS_SCORE:
0.4703
DSS_SCORE:
0.606
HELIX:
0.0312
FCONS_SCORE:
0.8828
RIG_SCORE:
0.6856
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G60D
SIDM00926
Non-Small Cell Lung Carcinoma
GDSC
LPLATVSPG
DEG_SIAH_1
0.6087
p.G60D
NCI-H2172
lung
COSMIC
LPLATVSPG
DEG_SIAH_1
0.6087
p.A69T
SIDM00651
Non-Small Cell Lung Carcinoma
GDSC
LPLATVSPG
DEG_SIAH_1
0.0833
p.A69T
NCI-H1155
lung
COSMIC
LPLATVSPG
DEG_SIAH_1
0.0833
p.R47Q
ACH-000907
Kidney Cancer
CCLE
LPLATVSPG
DEG_SIAH_1
0.1944
Drug responses associated with CAPS mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPLATVSPG
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13938
Calcyphosin
DEG_SIAH_1
52:60
LPLATVSPG
SIAH1,SIAH2,SIAH3
0.9917
More...