DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LPTPNGT
Uniprot ID:
Q92538
Source protein:
Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Source gene:
GBF1
Class:
DEG_SCF_FBW7_1
Location:
249:255
E3 ligase:
FBXW7
DEGRON score:
0.9288
ASA_SCORE:
75.2
COIL:
0.905
CONS_SCORE:
0.2066
DSS_SCORE:
0.6773
HELIX:
0.0233
FCONS_SCORE:
0.9297
RIG_SCORE:
0.6091
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T256I
TCGA-24-1845
OV
TCGA
LPTPNGT
DEG_SCF_FBW7_1
0.3056
p.T256I
DO29920
OV
ICGC
LPTPNGT
DEG_SCF_FBW7_1
0.3056
p.M240I
TCGA-4G-AAZO
CHOL
TCGA
LPTPNGT
DEG_SCF_FBW7_1
0.0833
p.M240T
DO228947
LICA
ICGC
LPTPNGT
DEG_SCF_FBW7_1
0.0833
p.S258L
SIDM01124
Non-Small Cell Lung Carcinoma
GDSC
LPTPNGT
DEG_SCF_FBW7_1
0.25
p.S258L
ACH-000945
Lung Cancer
CCLE
LPTPNGT
DEG_SCF_FBW7_1
0.25
p.S258L
NCI-H650
lung
COSMIC
LPTPNGT
DEG_SCF_FBW7_1
0.25
Drug responses associated with GBF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LPTPNGT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q92538
Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
DEG_SCF_FBW7_1
249:255
LPTPNGT
FBXW7
0.9288
More...