DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LQLYSD
Uniprot ID:
P54257
Source protein:
Huntingtin-associated protein 1
Source gene:
HAP1
Class:
LIG_APCC_ABBA_1
Location:
253:258
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9515
ASA_SCORE:
101.95
COIL:
0.4163
CONS_SCORE:
0.9228
DSS_SCORE:
0.6595
HELIX:
0.5752
FCONS_SCORE:
1.2744
RIG_SCORE:
0.7141
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R257W
DO225337
BRCA
ICGC
LQLYSD
LIG_APCC_ABBA_1
0.8634
p.Y256S
SIDM01004
Chronic Myelogenous Leukemia
GDSC
LQLYSD
LIG_APCC_ABBA_1
0.712
p.Y256S
SIDM00216
Colorectal Carcinoma
GDSC
LQLYSD
LIG_APCC_ABBA_1
0.712
p.Y256S
SIDM00075
Non-Cancerous
GDSC
LQLYSD
LIG_APCC_ABBA_1
0.712
p.Y256S
SIDM00193
Colorectal Carcinoma
GDSC
LQLYSD
LIG_APCC_ABBA_1
0.712
p.Y256S
SIDM00267
Biliary Tract Carcinoma
GDSC
LQLYSD
LIG_APCC_ABBA_1
0.712
p.Y256S
SIDM00590
Oral Cavity Carcinoma
GDSC
LQLYSD
LIG_APCC_ABBA_1
0.712
p.Y256S
SIDM00293
Small Cell Lung Carcinoma
GDSC
LQLYSD
LIG_APCC_ABBA_1
0.712
p.Y256S
SIDM00598
Squamous Cell Lung Carcinoma
GDSC
LQLYSD
LIG_APCC_ABBA_1
0.712
p.Y256S
SIDM00251
Gastric Carcinoma
GDSC
LQLYSD
LIG_APCC_ABBA_1
0.712
p.Y256S
SIDM00489
Oral Cavity Carcinoma
GDSC
LQLYSD
LIG_APCC_ABBA_1
0.712
p.Y256S
SIDM00273
Glioblastoma
GDSC
LQLYSD
LIG_APCC_ABBA_1
0.712
p.Y256S
SIDM00171
Colorectal Carcinoma
GDSC
LQLYSD
LIG_APCC_ABBA_1
0.712
p.Y256S
SNU-175
large_intestine
COSMIC
LQLYSD
LIG_APCC_ABBA_1
0.712
p.Y256S
KCL-22
haematopoietic_and_lymphoid_tissue
COSMIC
LQLYSD
LIG_APCC_ABBA_1
0.712
p.Y256S
SNU-81
large_intestine
COSMIC
LQLYSD
LIG_APCC_ABBA_1
0.712
p.D258N
DO26790
LUSC
ICGC
LQLYSD
LIG_APCC_ABBA_1
0.6932
p.H252Y
LU-99A
lung
COSMIC
LQLYSD
LIG_APCC_ABBA_1
0.3056
p.D250N
TCGA-33-4566
LUSC
TCGA
LQLYSD
LIG_APCC_ABBA_1
0.25
p.E262K
TCGA-FW-A3R5
SKCM
TCGA
LQLYSD
LIG_APCC_ABBA_1
0.2222
p.Q262H
DO228422
LICA
ICGC
LQLYSD
LIG_APCC_ABBA_1
0.2222
p.Y264S
SNU-81
large_intestine
COSMIC
LQLYSD
LIG_APCC_ABBA_1
0.1667
p.Y264S
KCL-22
haematopoietic_and_lymphoid_tissue
COSMIC
LQLYSD
LIG_APCC_ABBA_1
0.1667
p.Y264S
SNU-175
large_intestine
COSMIC
LQLYSD
LIG_APCC_ABBA_1
0.1667
p.E245K
DO27074
LUSC
ICGC
LQLYSD
LIG_APCC_ABBA_1
0.1111
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Drug responses associated with HAP1 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of LQLYSD
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P54257
Huntingtin-associated protein 1
LIG_APCC_ABBA_1
253:258
LQLYSD
APC,CDC20,FZR1
0.9515
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