DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRIGLFYMD
Uniprot ID:
Q15008
Source protein:
26S proteasome non-ATPase regulatory subunit 6
Source gene:
PSMD6
Class:
DEG_APCC_DBOX_1
Location:
145:153
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5856
ASA_SCORE:
31.0556
COIL:
0.364
CONS_SCORE:
0.6645
DSS_SCORE:
0.0059
HELIX:
0.6138
FCONS_SCORE:
1.246
RIG_SCORE:
0.9811
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K163N
TCGA-05-4382
LUAD
TCGA
LRIGLFYMD
DEG_APCC_DBOX_1
0.1667
p.R159Q
TCGA-B5-A1MR
UCEC
TCGA
LRIGLFYMD
DEG_APCC_DBOX_1
0.1667
p.R159Q
TCGA-DK-A6AW
BLCA
TCGA
LRIGLFYMD
DEG_APCC_DBOX_1
0.1667
p.R159Q
DO48566
BLCA
ICGC
LRIGLFYMD
DEG_APCC_DBOX_1
0.1667
p.R159Q
DO41758
UCEC
ICGC
LRIGLFYMD
DEG_APCC_DBOX_1
0.1667
p.R159Q
ACH-000993
Endometrial/Uterine Cancer
CCLE
LRIGLFYMD
DEG_APCC_DBOX_1
0.1667
p.L144F
TCGA-ZF-AA52
BLCA
TCGA
LRIGLFYMD
DEG_APCC_DBOX_1
0.3056
p.L144F
DO219095
BLCA
ICGC
LRIGLFYMD
DEG_APCC_DBOX_1
0.3056
p.K157Q
DO4012
BRCA
ICGC
LRIGLFYMD
DEG_APCC_DBOX_1
0.2222
p.T158K
DO229018
LICA
ICGC
LRIGLFYMD
DEG_APCC_DBOX_1
0.1944
p.A160G
DO48757
LIRI
ICGC
LRIGLFYMD
DEG_APCC_DBOX_1
0.1389
p.G147C
DO222342
STAD
ICGC
LRIGLFYMD
DEG_APCC_DBOX_1
0.76
p.I153V
SIDM00853
Other Sarcomas
GDSC
LRIGLFYMD
DEG_APCC_DBOX_1
0.7076
p.I153V
GCT
soft_tissue
COSMIC
LRIGLFYMD
DEG_APCC_DBOX_1
0.7076
p.R136H
SIDM00118
Colorectal Carcinoma
GDSC
LRIGLFYMD
DEG_APCC_DBOX_1
0.0833
p.R136H
HCC2998
large_intestine
COSMIC
LRIGLFYMD
DEG_APCC_DBOX_1
0.0833
p.Q146R
CCK-81
large_intestine
COSMIC
LRIGLFYMD
DEG_APCC_DBOX_1
0.7329
p.D137E
HCC-366
lung
COSMIC
LRIGLFYMD
DEG_APCC_DBOX_1
0.1111
p.Q145R
CCK-81
large_intestine
COSMIC
LRIGLFYMD
DEG_APCC_DBOX_1
0.7329
p.D136E
HCC-366
lung
COSMIC
LRIGLFYMD
DEG_APCC_DBOX_1
0.0833
Drug responses associated with PSMD6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRIGLFYMD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q15008
26S proteasome non-ATPase regulatory subunit 6
DEG_APCC_DBOX_1
145:153
LRIGLFYMD
APC,CDC20,FZR1
0.5856
More...