DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRKSLSSMT
Uniprot ID:
P00748
Source protein:
Coagulation factor XII
Source gene:
F12
Class:
DEG_APCC_DBOX_1
Location:
363:371
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9284
ASA_SCORE:
84.2444
COIL:
0.7946
CONS_SCORE:
0.5586
DSS_SCORE:
0.3177
HELIX:
0.1241
FCONS_SCORE:
0.7673
RIG_SCORE:
0.7504
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G360W
TCGA-EE-A2MM
SKCM
TCGA
LRKSLSSMT
DEG_APCC_DBOX_1
0.25
p.G360W
DO37770
SKCM
ICGC
LRKSLSSMT
DEG_APCC_DBOX_1
0.25
p.R381H
DO23468
LINC
ICGC
LRKSLSSMT
DEG_APCC_DBOX_1
0.0556
p.S366N
SIDM01591
Breast Carcinoma
GDSC
LRKSLSSMT
DEG_APCC_DBOX_1
0.7069
p.S366N
ACH-000540
Non-Cancerous
CCLE
LRKSLSSMT
DEG_APCC_DBOX_1
0.7069
Drug responses associated with F12 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRKSLSSMT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P00748
Coagulation factor XII
DEG_APCC_DBOX_1
363:371
LRKSLSSMT
APC,CDC20,FZR1
0.9284
More...