DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRLFKD
Uniprot ID:
P35354
Source protein:
Prostaglandin G/H synthase 2
Source gene:
PTGS2
Class:
LIG_APCC_ABBA_1
Location:
230:235
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7839
ASA_SCORE:
71.5
COIL:
0.5087
CONS_SCORE:
0.751
DSS_SCORE:
0.2564
HELIX:
0.1478
FCONS_SCORE:
1.2494
RIG_SCORE:
0.8565
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L232I
TCGA-44-7662
LUAD
TCGA
LRLFKD
LIG_APCC_ABBA_1
0.6063
p.L232I
DO23597
LUAD
ICGC
LRLFKD
LIG_APCC_ABBA_1
0.6063
p.R231H
TCGA-AP-A0LM
UCEC
TCGA
LRLFKD
LIG_APCC_ABBA_1
0.7133
p.R231H
TCGA-CA-6717
COAD
TCGA
LRLFKD
LIG_APCC_ABBA_1
0.7133
p.R231H
DO8264
COAD
ICGC
LRLFKD
LIG_APCC_ABBA_1
0.7133
p.R231H
DO43306
UCEC
ICGC
LRLFKD
LIG_APCC_ABBA_1
0.7133
p.R228H
TCGA-BH-A0DD
BRCA
TCGA
LRLFKD
LIG_APCC_ABBA_1
0.2778
p.R228H
TCGA-P6-A5OG
ACC
TCGA
LRLFKD
LIG_APCC_ABBA_1
0.2778
p.R228H
DO2008
BRCA
ICGC
LRLFKD
LIG_APCC_ABBA_1
0.2778
p.R228H
SIDM00435
Acute Myeloid Leukemia
GDSC
LRLFKD
LIG_APCC_ABBA_1
0.2778
p.R228H
SIDM00618
Hepatocellular Carcinoma
GDSC
LRLFKD
LIG_APCC_ABBA_1
0.2778
p.R228H
SIDM00361
Non-Small Cell Lung Carcinoma
GDSC
LRLFKD
LIG_APCC_ABBA_1
0.2778
p.R228H
SIDM01694
B-Lymphoblastic Leukemia
GDSC
LRLFKD
LIG_APCC_ABBA_1
0.2778
p.R231C
TCGA-E9-A1QZ
BRCA
TCGA
LRLFKD
LIG_APCC_ABBA_1
0.719
p.R231C
DO4737
BRCA
ICGC
LRLFKD
LIG_APCC_ABBA_1
0.719
p.R231C
DO33344
PACA
ICGC
LRLFKD
LIG_APCC_ABBA_1
0.719
p.R231C
SIDM00214
Colorectal Carcinoma
GDSC
LRLFKD
LIG_APCC_ABBA_1
0.719
p.R231C
ACH-000955
Colon/Colorectal Cancer
CCLE
LRLFKD
LIG_APCC_ABBA_1
0.719
p.R231C
SNU-407
large_intestine
COSMIC
LRLFKD
LIG_APCC_ABBA_1
0.719
p.R228C
TCGA-XK-AAIW
PRAD
TCGA
LRLFKD
LIG_APCC_ABBA_1
0.2778
p.R228C
DO51407
PRAD
ICGC
LRLFKD
LIG_APCC_ABBA_1
0.2778
p.R228C
SIDM00217
Colorectal Carcinoma
GDSC
LRLFKD
LIG_APCC_ABBA_1
0.2778
p.R228C
ACH-000999
Colon/Colorectal Cancer
CCLE
LRLFKD
LIG_APCC_ABBA_1
0.2778
p.R228C
SNU-1040
large_intestine
COSMIC
LRLFKD
LIG_APCC_ABBA_1
0.2778
p.R228S
DO231965
LICA
ICGC
LRLFKD
LIG_APCC_ABBA_1
0.2778
p.Q227K
DO229018
LICA
ICGC
LRLFKD
LIG_APCC_ABBA_1
0.25
p.Y240C
SIDM01113
Other Sarcomas
GDSC
LRLFKD
LIG_APCC_ABBA_1
0.1944
p.Y240C
ACH-000939
Sarcoma
CCLE
LRLFKD
LIG_APCC_ABBA_1
0.1944
p.Y240C
SK-UT-1
soft_tissue
COSMIC
LRLFKD
LIG_APCC_ABBA_1
0.1944
Drug responses associated with PTGS2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRLFKD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P35354
Prostaglandin G/H synthase 2
LIG_APCC_ABBA_1
230:235
LRLFKD
APC,CDC20,FZR1
0.7839
More...