DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LRLGLTDIN
Uniprot ID:
Q9Y4P1
Source protein:
Cysteine protease ATG4B
Source gene:
ATG4B
Class:
DEG_APCC_DBOX_1
Location:
228:236
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8756
ASA_SCORE:
54.9889
COIL:
0.7032
CONS_SCORE:
0.6773
DSS_SCORE:
0.0401
HELIX:
0.1039
FCONS_SCORE:
1.2293
RIG_SCORE:
0.8615
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R229H
TCGA-AP-A1DV
UCEC
TCGA
LRLGLTDIN
DEG_APCC_DBOX_1
0.8244
p.R229H
TCGA-EO-A22U
UCEC
TCGA
LRLGLTDIN
DEG_APCC_DBOX_1
0.8244
p.T233R
TCGA-IG-A97H
ESCA
TCGA
LRLGLTDIN
DEG_APCC_DBOX_1
0.6765
p.P230S
DO229027
LICA
ICGC
LRLGLTDIN
DEG_APCC_DBOX_1
0.6752
p.A244T
DO41008
UCEC
ICGC
LRLGLTDIN
DEG_APCC_DBOX_1
0.2222
p.A237V
DO43891
UCEC
ICGC
LRLGLTDIN
DEG_APCC_DBOX_1
0.3056
p.V223L
SIDM00652
Small Cell Lung Carcinoma
GDSC
LRLGLTDIN
DEG_APCC_DBOX_1
0.1944
p.V223L
ACH-000780
Lung Cancer
CCLE
LRLGLTDIN
DEG_APCC_DBOX_1
0.1944
p.V223L
NCI-H1105
lung
COSMIC
LRLGLTDIN
DEG_APCC_DBOX_1
0.1944
p.T242M
ACH-000897
Thyroid Cancer
CCLE
LRLGLTDIN
DEG_APCC_DBOX_1
0.1667
p.H226R
AN3-CA
endometrium
COSMIC
LRLGLTDIN
DEG_APCC_DBOX_1
0.2778
p.D240Y
HT55
large_intestine
COSMIC
LRLGLTDIN
DEG_APCC_DBOX_1
0.2222
p.E238K
TT
thyroid
COSMIC
LRLGLTDIN
DEG_APCC_DBOX_1
0.2778
p.R233H
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
LRLGLTDIN
DEG_APCC_DBOX_1
0.8244
Drug responses associated with ATG4B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRLGLTDIN
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y4P1
Cysteine protease ATG4B
DEG_APCC_DBOX_1
228:236
LRLGLTDIN
APC,CDC20,FZR1
0.8756
More...