DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LRVALLLLL
Uniprot ID:
P19876
Source protein:
C-X-C motif chemokine 3
Source gene:
CXCL3
Class:
DEG_APCC_DBOX_1
Location:
16:24
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6875
ASA_SCORE:
46.8111
COIL:
0.0027
CONS_SCORE:
0.5403
DSS_SCORE:
0.0094
HELIX:
0.9963
FCONS_SCORE:
1.5783
RIG_SCORE:
0.9767
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R31H
TCGA-AJ-A8CW
UCEC
TCGA
LRVALLLLL
DEG_APCC_DBOX_1
0.1389
p.R31H
DO52400
UCEC
ICGC
LRVALLLLL
DEG_APCC_DBOX_1
0.1389
p.R31H
SIDM01086
B-Lymphoblastic Leukemia
GDSC
LRVALLLLL
DEG_APCC_DBOX_1
0.1389
p.R31H
ACH-000874
Leukemia
CCLE
LRVALLLLL
DEG_APCC_DBOX_1
0.1389
p.R31H
RS4-11
haematopoietic_and_lymphoid_tissue
COSMIC
LRVALLLLL
DEG_APCC_DBOX_1
0.1389
p.R30Q
TCGA-D9-A6EC
SKCM
TCGA
LRVALLLLL
DEG_APCC_DBOX_1
0.1667
p.R30Q
DO50291
SKCM
ICGC
LRVALLLLL
DEG_APCC_DBOX_1
0.1667
p.S11R
DO229003
COCA
ICGC
LRVALLLLL
DEG_APCC_DBOX_1
0.1944
p.A32S
DO229268
THCA
ICGC
LRVALLLLL
DEG_APCC_DBOX_1
0.1111
p.A28T
DO229268
THCA
ICGC
LRVALLLLL
DEG_APCC_DBOX_1
0.2222
p.G34A
SIDM00009
Acute Myeloid Leukemia
GDSC
LRVALLLLL
DEG_APCC_DBOX_1
0.0556
p.G34A
MC-1010
haematopoietic_and_lymphoid_tissue
COSMIC
LRVALLLLL
DEG_APCC_DBOX_1
0.0556
Drug responses associated with CXCL3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LRVALLLLL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P19876
C-X-C motif chemokine 3
DEG_APCC_DBOX_1
16:24
LRVALLLLL
APC,CDC20,FZR1
0.6875
More...