DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LSLFPD
Uniprot ID:
P17658
Source protein:
Potassium voltage-gated channel subfamily A member 6
Source gene:
KCNA6
Class:
LIG_APCC_ABBA_1
Location:
59:64
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7086
ASA_SCORE:
55.0167
COIL:
0.6475
CONS_SCORE:
0.4579
DSS_SCORE:
0.1978
HELIX:
0.3365
FCONS_SCORE:
1.1931
RIG_SCORE:
0.8483
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P70S
TCGA-3A-A9IV
PAAD
TCGA
LSLFPD
LIG_APCC_ABBA_1
0.1667
p.P70S
DO218959
PAAD
ICGC
LSLFPD
LIG_APCC_ABBA_1
0.1667
p.R57H
TCGA-55-7283
LUAD
TCGA
LSLFPD
LIG_APCC_ABBA_1
0.2778
p.R57H
DO23606
LUAD
ICGC
LSLFPD
LIG_APCC_ABBA_1
0.2778
p.E53Q
TCGA-60-2714
LUSC
TCGA
LSLFPD
LIG_APCC_ABBA_1
0.1667
p.E53Q
DO26530
LUSC
ICGC
LSLFPD
LIG_APCC_ABBA_1
0.1667
p.E53D
TCGA-68-8250
LUSC
TCGA
LSLFPD
LIG_APCC_ABBA_1
0.1667
p.E53D
DO26993
LUSC
ICGC
LSLFPD
LIG_APCC_ABBA_1
0.1667
p.R73Q
TCGA-BS-A0UV
UCEC
TCGA
LSLFPD
LIG_APCC_ABBA_1
0.0833
p.R73Q
TCGA-FI-A2D5
UCEC
TCGA
LSLFPD
LIG_APCC_ABBA_1
0.0833
p.R73Q
DO42793
UCEC
ICGC
LSLFPD
LIG_APCC_ABBA_1
0.0833
p.R73Q
DO41331
UCEC
ICGC
LSLFPD
LIG_APCC_ABBA_1
0.0833
p.R72W
TCGA-D1-A1NZ
UCEC
TCGA
LSLFPD
LIG_APCC_ABBA_1
0.1111
p.R72W
DO41536
UCEC
ICGC
LSLFPD
LIG_APCC_ABBA_1
0.1111
p.R51C
TCGA-EO-A3AU
UCEC
TCGA
LSLFPD
LIG_APCC_ABBA_1
0.1111
p.R51C
TCGA-VQ-A91D
STAD
TCGA
LSLFPD
LIG_APCC_ABBA_1
0.1111
p.R51C
DO51783
STAD
ICGC
LSLFPD
LIG_APCC_ABBA_1
0.1111
p.R51C
DO43827
UCEC
ICGC
LSLFPD
LIG_APCC_ABBA_1
0.1111
p.R72Q
TCGA-L5-A4OO
ESCA
TCGA
LSLFPD
LIG_APCC_ABBA_1
0.1111
p.R57C
DO230343
COCA
ICGC
LSLFPD
LIG_APCC_ABBA_1
0.2778
p.P63Q
DO50912
LICA
ICGC
LSLFPD
LIG_APCC_ABBA_1
0.5924
p.G68R
DO220872
MELA
ICGC
LSLFPD
LIG_APCC_ABBA_1
0.2222
p.P63S
DO35376
PACA
ICGC
LSLFPD
LIG_APCC_ABBA_1
0.5641
p.R51H
DO51094
PRAD
ICGC
LSLFPD
LIG_APCC_ABBA_1
0.1111
p.S60T
ACH-000791
Lung Cancer
CCLE
LSLFPD
LIG_APCC_ABBA_1
0.6005
Drug responses associated with KCNA6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LSLFPD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P17658
Potassium voltage-gated channel subfamily A member 6
LIG_APCC_ABBA_1
59:64
LSLFPD
APC,CDC20,FZR1
0.7086
More...