DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LSPFAE
Uniprot ID:
Q96RR1
Source protein:
Twinkle mtDNA helicase
Source gene:
TWNK
Class:
LIG_APCC_ABBA_1
Location:
81:86
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8763
ASA_SCORE:
42.55
COIL:
0.7343
CONS_SCORE:
0.6355
DSS_SCORE:
0.3101
HELIX:
0.0463
FCONS_SCORE:
1.3517
RIG_SCORE:
0.76
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S87F
SIDM01175
Other Sarcomas
GDSC
LSPFAE
LIG_APCC_ABBA_1
0.3056
p.S87F
SW684
soft_tissue
COSMIC
LSPFAE
LIG_APCC_ABBA_1
0.3056
p.L81V
SIDM00869
Non-Cancerous
GDSC
LSPFAE
LIG_APCC_ABBA_1
0.5654
p.L81V
SIDM00964
Non-Cancerous
GDSC
LSPFAE
LIG_APCC_ABBA_1
0.5654
p.A80T
SIDM00224
Mesothelioma
GDSC
LSPFAE
LIG_APCC_ABBA_1
0.3056
p.A80T
IST-MES1
pleura
COSMIC
LSPFAE
LIG_APCC_ABBA_1
0.3056
p.D94Y
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
LSPFAE
LIG_APCC_ABBA_1
0.1111
p.N96S
SNU-1040
large_intestine
COSMIC
LSPFAE
LIG_APCC_ABBA_1
0.0556
Drug responses associated with TWNK mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LSPFAE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96RR1
Twinkle mtDNA helicase
LIG_APCC_ABBA_1
81:86
LSPFAE
APC,CDC20,FZR1
0.8763
More...