DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LSTPVVE
Uniprot ID:
P29084
Source protein:
Transcription initiation factor IIE subunit beta
Source gene:
GTF2E2
Class:
DEG_SCF_FBW7_2
Location:
17:23
E3 ligase:
FBXW7
DEGRON score:
0.993
ASA_SCORE:
86.4857
COIL:
0.7439
CONS_SCORE:
0.5242
DSS_SCORE:
0.5054
HELIX:
0.1997
FCONS_SCORE:
1.0707
RIG_SCORE:
0.7204
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L17I
TCGA-AJ-A3EL
UCEC
TCGA
LSTPVVE
DEG_SCF_FBW7_2
0.6063
p.L17I
DO41542
UCEC
ICGC
LSTPVVE
DEG_SCF_FBW7_2
0.6063
p.S31L
TCGA-BH-A0HP
BRCA
TCGA
LSTPVVE
DEG_SCF_FBW7_2
0.1111
p.S31L
DO1755
BRCA
ICGC
LSTPVVE
DEG_SCF_FBW7_2
0.1111
p.R9M
TCGA-D3-A2JN
SKCM
TCGA
LSTPVVE
DEG_SCF_FBW7_2
0.5556
p.R9M
DO47590
SKCM
ICGC
LSTPVVE
DEG_SCF_FBW7_2
0.5556
p.R15Q
TCGA-EO-A3B0
UCEC
TCGA
LSTPVVE
DEG_SCF_FBW7_2
0.2778
p.R15Q
DO219773
UCEC
ICGC
LSTPVVE
DEG_SCF_FBW7_2
0.2778
p.E8Q
DO233916
GACA
ICGC
LSTPVVE
DEG_SCF_FBW7_2
0.5278
p.R25C
SIDM01165
Pancreatic Carcinoma
GDSC
LSTPVVE
DEG_SCF_FBW7_2
0.2778
p.R25C
SIDM00039
Ovarian Carcinoma
GDSC
LSTPVVE
DEG_SCF_FBW7_2
0.2778
p.S29F
ACH-002396
Bone Cancer
CCLE
LSTPVVE
DEG_SCF_FBW7_2
0.1667
p.S29F
Sarc9371
bone
COSMIC
LSTPVVE
DEG_SCF_FBW7_2
0.1667
Drug responses associated with GTF2E2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LSTPVVE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P29084
Transcription initiation factor IIE subunit beta
DEG_SCF_FBW7_2
17:23
LSTPVVE
FBXW7
0.993
More...