DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
LTPTGT
Uniprot ID:
P48454
Source protein:
Serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform
Source gene:
PPP3CC
Class:
DEG_SCF_FBW7_1
Location:
420:425
E3 ligase:
FBXW7
DEGRON score:
0.8405
ASA_SCORE:
65.5667
COIL:
0.8653
CONS_SCORE:
0.3333
DSS_SCORE:
0.2324
HELIX:
0.0468
FCONS_SCORE:
0.8019
RIG_SCORE:
0.752
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R417Q
TCGA-A5-A0G2
UCEC
TCGA
LTPTGT
DEG_SCF_FBW7_1
0.25
p.L435F
TCGA-AX-A2IN
UCEC
TCGA
LTPTGT
DEG_SCF_FBW7_1
0.1667
p.L426F
DO42328
UCEC
ICGC
LTPTGT
DEG_SCF_FBW7_1
0.3056
p.P427S
DO41903
UCEC
ICGC
LTPTGT
DEG_SCF_FBW7_1
0.2778
p.S414L
SIDM00025
Head and Neck Carcinoma
GDSC
LTPTGT
DEG_SCF_FBW7_1
0.1667
p.S414L
UDSCC2
upper_aerodigestive_tract
COSMIC
LTPTGT
DEG_SCF_FBW7_1
0.1667
Drug responses associated with PPP3CC mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPTGT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P48454
Serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform
DEG_SCF_FBW7_1
420:425
LTPTGT
FBXW7
0.8405
More...