DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTPYQS
Uniprot ID:
P27694
Source protein:
Replication protein A 70 kDa DNA-binding subunit
Source gene:
RPA1
Class:
DEG_SCF_FBW7_1
Location:
190:195
E3 ligase:
FBXW7
DEGRON score:
0.915
ASA_SCORE:
48.6333
COIL:
0.8303
CONS_SCORE:
0.5631
DSS_SCORE:
0.1974
HELIX:
0.0423
FCONS_SCORE:
1.0097
RIG_SCORE:
0.8161
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q181E
TCGA-DM-A1HB
COAD
TCGA
LTPYQS
DEG_SCF_FBW7_1
0.0833
p.A188T
DO228627
GACA
ICGC
LTPYQS
DEG_SCF_FBW7_1
0.2778
p.W197L
DO229041
LICA
ICGC
LTPYQS
DEG_SCF_FBW7_1
0.2778
p.P192L
DO45159
LIRI
ICGC
LTPYQS
DEG_SCF_FBW7_1
0.7582
p.T204S
SIDM01007
T-Lymphoblastic Leukemia
GDSC
LTPYQS
DEG_SCF_FBW7_1
0.0833
p.T204S
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
LTPYQS
DEG_SCF_FBW7_1
0.0833
Drug responses associated with RPA1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTPYQS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P27694
Replication protein A 70 kDa DNA-binding subunit
DEG_SCF_FBW7_1
190:195
LTPYQS
FBXW7
0.915
More...