DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LTTPAST
Uniprot ID:
Q99743
Source protein:
Neuronal PAS domain-containing protein 2
Source gene:
NPAS2
Class:
DEG_SCF_FBW7_1
Location:
647:653
E3 ligase:
FBXW7
DEGRON score:
0.9976
ASA_SCORE:
78.8
COIL:
0.9479
CONS_SCORE:
0.27
DSS_SCORE:
0.6302
HELIX:
0.0237
FCONS_SCORE:
0.6841
RIG_SCORE:
0.6474
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N646S
TCGA-77-A5GH
LUSC
TCGA
LTTPAST
DEG_SCF_FBW7_1
0.3056
p.N646S
DO45452
LUSC
ICGC
LTTPAST
DEG_SCF_FBW7_1
0.3056
p.A639D
TCGA-BR-8360
STAD
TCGA
LTTPAST
DEG_SCF_FBW7_1
0.1111
p.A639D
DO47745
STAD
ICGC
LTTPAST
DEG_SCF_FBW7_1
0.1111
p.A640T
DO227802
COCA
ICGC
LTTPAST
DEG_SCF_FBW7_1
0.1389
p.Q655H
DO229035
LICA
ICGC
LTTPAST
DEG_SCF_FBW7_1
0.2778
p.A637S
DO229038
LICA
ICGC
LTTPAST
DEG_SCF_FBW7_1
0.0556
p.N646H
DO48746
LIRI
ICGC
LTTPAST
DEG_SCF_FBW7_1
0.3056
p.Q659H
DO51531
PACA
ICGC
LTTPAST
DEG_SCF_FBW7_1
0.1667
p.A640V
SIDM01611
Endometrial Carcinoma
GDSC
LTTPAST
DEG_SCF_FBW7_1
0.1389
p.A640V
ACH-000996
Endometrial/Uterine Cancer
CCLE
LTTPAST
DEG_SCF_FBW7_1
0.1389
Drug responses associated with NPAS2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LTTPAST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q99743
Neuronal PAS domain-containing protein 2
DEG_SCF_FBW7_1
647:653
LTTPAST
FBXW7
0.9976
More...