DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
LYIFQD
Uniprot ID:
Q9Y2T4
Source protein:
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform
Source gene:
PPP2R2C
Class:
LIG_APCC_ABBA_1
Location:
435:440
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6083
ASA_SCORE:
21.0167
COIL:
0.075
CONS_SCORE:
0.5498
DSS_SCORE:
0.1311
HELIX:
0.0012
FCONS_SCORE:
1.3234
RIG_SCORE:
0.9017
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.M446V
TCGA-AD-5900
COAD
TCGA
LYIFQD
LIG_APCC_ABBA_1
0.1667
p.N433K
TCGA-EK-A2PL
CESC
TCGA
LYIFQD
LIG_APCC_ABBA_1
0.2778
p.A431T
TCGA-XF-A8HF
BLCA
TCGA
LYIFQD
LIG_APCC_ABBA_1
0.2222
p.N426K
DO48979
CESC
ICGC
LYIFQD
LIG_APCC_ABBA_1
0.0833
p.M439V
DO8514
COAD
ICGC
LYIFQD
LIG_APCC_ABBA_1
0.7208
Drug responses associated with PPP2R2C mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LYIFQD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y2T4
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform
LIG_APCC_ABBA_1
435:440
LYIFQD
APC,CDC20,FZR1
0.6083
More...