DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
LYPYGD
Uniprot ID:
A6NNT2
Source protein:
Uncharacterized protein C16orf96
Source gene:
C16orf96
Class:
LIG_APCC_ABBA_1
Location:
996:1001
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7772
ASA_SCORE:
67.65
COIL:
0.8563
CONS_SCORE:
0.3664
DSS_SCORE:
0.071
HELIX:
0.0263
FCONS_SCORE:
1.0805
RIG_SCORE:
0.8083
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G1000R
TCGA-AG-A020
READ
TCGA
LYPYGD
LIG_APCC_ABBA_1
0.6457
p.G1000R
DO36451
READ
ICGC
LYPYGD
LIG_APCC_ABBA_1
0.6457
p.T995M
DO230323
COCA
ICGC
LYPYGD
LIG_APCC_ABBA_1
0.3056
p.T995M
ACH-000936
Ovarian Cancer
CCLE
LYPYGD
LIG_APCC_ABBA_1
0.3056
p.P1002S
DO23268
LINC
ICGC
LYPYGD
LIG_APCC_ABBA_1
0.3056
p.V1004M
DO41199
UCEC
ICGC
LYPYGD
LIG_APCC_ABBA_1
0.25
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Drug responses associated with C16orf96 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of LYPYGD
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A6NNT2
Uncharacterized protein C16orf96
LIG_APCC_ABBA_1
996:1001
LYPYGD
APC,CDC20,FZR1
0.7772
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