DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
MFIFSE
Uniprot ID:
P17480
Source protein:
Nucleolar transcription factor 1
Source gene:
UBTF
Class:
LIG_APCC_ABBA_1
Location:
414:419
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6009
ASA_SCORE:
60.8333
COIL:
0.2317
CONS_SCORE:
0.6124
DSS_SCORE:
0.5523
HELIX:
0.693
FCONS_SCORE:
1.0371
RIG_SCORE:
0.7735
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R422Q
TCGA-A5-A1OF
UCEC
TCGA
MFIFSE
LIG_APCC_ABBA_1
0.25
p.R422Q
DO42568
UCEC
ICGC
MFIFSE
LIG_APCC_ABBA_1
0.25
p.A425V
IM-95
stomach
COSMIC
MFIFSE
LIG_APCC_ABBA_1
0.1667
Drug responses associated with UBTF mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of MFIFSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P17480
Nucleolar transcription factor 1
LIG_APCC_ABBA_1
414:419
MFIFSE
APC,CDC20,FZR1
0.6009
More...