DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
MRTLLLVLW
Uniprot ID:
Q9BVK6
Source protein:
Transmembrane emp24 domain-containing protein 9
Source gene:
TMED9
Class:
DEG_APCC_DBOX_1
Location:
22:30
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6741
ASA_SCORE:
50.6889
COIL:
0.0858
CONS_SCORE:
0.5007
DSS_SCORE:
0.0137
HELIX:
0.9148
FCONS_SCORE:
1.3208
RIG_SCORE:
1.0198
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T24A
TCGA-G4-6314
COAD
TCGA
MRTLLLVLW
DEG_APCC_DBOX_1
0.6028
p.T24A
DO10381
COAD
ICGC
MRTLLLVLW
DEG_APCC_DBOX_1
0.6028
p.W30L
DO229045
LICA
ICGC
MRTLLLVLW
DEG_APCC_DBOX_1
0.5904
p.V28A
DO228504
MALY
ICGC
MRTLLLVLW
DEG_APCC_DBOX_1
0.5825
p.T24S
SIDM00431
T-Lymphoblastic Leukemia
GDSC
MRTLLLVLW
DEG_APCC_DBOX_1
0.6005
p.G35E
ACH-001328
Skin Cancer
CCLE
MRTLLLVLW
DEG_APCC_DBOX_1
0.1944
Drug responses associated with TMED9 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of MRTLLLVLW
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BVK6
Transmembrane emp24 domain-containing protein 9
DEG_APCC_DBOX_1
22:30
MRTLLLVLW
APC,CDC20,FZR1
0.6741
More...