DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
MRVHIE
Uniprot ID:
P55795
Source protein:
Heterogeneous nuclear ribonucleoprotein H2
Source gene:
HNRNPH2
Class:
LIG_APCC_ABBA_1
Location:
315:320
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7228
ASA_SCORE:
40.5667
COIL:
0.1303
CONS_SCORE:
0.4699
DSS_SCORE:
0.2952
HELIX:
0.0068
FCONS_SCORE:
0.8403
RIG_SCORE:
0.8086
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G329S
TCGA-CD-A4MG
STAD
TCGA
MRVHIE
LIG_APCC_ABBA_1
0.0833
p.G329S
DO48009
STAD
ICGC
MRVHIE
LIG_APCC_ABBA_1
0.0833
p.D324N
TCGA-D1-A103
UCEC
TCGA
MRVHIE
LIG_APCC_ABBA_1
0.2222
p.D324N
DO42312
UCEC
ICGC
MRVHIE
LIG_APCC_ABBA_1
0.2222
p.D324N
SIDM00214
Colorectal Carcinoma
GDSC
MRVHIE
LIG_APCC_ABBA_1
0.2222
p.D324N
ACH-000955
Colon/Colorectal Cancer
CCLE
MRVHIE
LIG_APCC_ABBA_1
0.2222
p.D324N
SNU-407
large_intestine
COSMIC
MRVHIE
LIG_APCC_ABBA_1
0.2222
p.R326I
TCGA-DU-6392
LGG
TCGA
MRVHIE
LIG_APCC_ABBA_1
0.1667
p.R326I
DO22237
LGG
ICGC
MRVHIE
LIG_APCC_ABBA_1
0.1667
p.G325C
DO218553
BRCA
ICGC
MRVHIE
LIG_APCC_ABBA_1
0.1944
p.G325V
DO228978
LICA
ICGC
MRVHIE
LIG_APCC_ABBA_1
0.1944
p.G329C
DO229028
LICA
ICGC
MRVHIE
LIG_APCC_ABBA_1
0.0833
p.N307D
DO50976
LICA
ICGC
MRVHIE
LIG_APCC_ABBA_1
0.1111
Drug responses associated with HNRNPH2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of MRVHIE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P55795
Heterogeneous nuclear ribonucleoprotein H2
LIG_APCC_ABBA_1
315:320
MRVHIE
APC,CDC20,FZR1
0.7228
More...