DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
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Degron:
NAQVTYSLLP
Uniprot ID:
Q9Y5F0
Source protein:
Protocadherin beta-13
Source gene:
PCDHB13
Class:
CBL_PTK
Location:
483:492
E3 ligase:
CBL
DEGRON score:
0.7162
ASA_SCORE:
25.07
COIL:
0.2434
CONS_SCORE:
0.6595
DSS_SCORE:
0.528
HELIX:
0.0133
FCONS_SCORE:
1.2938
RIG_SCORE:
0.7426
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S474N
TCGA-12-1598
GBM
TCGA
NAQVTYSLLP
CBL_PTK
0.0833
p.S474N
DO10871
GBM
ICGC
NAQVTYSLLP
CBL_PTK
0.0833
p.P492A
TCGA-13-1477
OV
TCGA
NAQVTYSLLP
CBL_PTK
0.7503
p.P492A
DO27978
OV
ICGC
NAQVTYSLLP
CBL_PTK
0.7503
p.A475T
TCGA-2W-A8YY
CESC
TCGA
NAQVTYSLLP
CBL_PTK
0.1111
p.A475T
DO223732
CESC
ICGC
NAQVTYSLLP
CBL_PTK
0.1111
p.S502F
TCGA-EB-A5UN
SKCM
TCGA
NAQVTYSLLP
CBL_PTK
0.0556
p.S502F
DO47267
SKCM
ICGC
NAQVTYSLLP
CBL_PTK
0.0556
p.D495N
TCGA-WE-A8K5
SKCM
TCGA
NAQVTYSLLP
CBL_PTK
0.25
p.D495N
DO51282
SKCM
ICGC
NAQVTYSLLP
CBL_PTK
0.25
p.D495N
SIDM00428
Acute Myeloid Leukemia
GDSC
NAQVTYSLLP
CBL_PTK
0.25
p.D495N
ACH-000294
Leukemia
CCLE
NAQVTYSLLP
CBL_PTK
0.25
p.D495N
NB-4
haematopoietic_and_lymphoid_tissue
COSMIC
NAQVTYSLLP
CBL_PTK
0.25
p.L491R
DO234406
ESAD
ICGC
NAQVTYSLLP
CBL_PTK
0.7316
p.T487I
DO231075
LUSC
ICGC
NAQVTYSLLP
CBL_PTK
0.5966
p.A484T
DO49118
PACA
ICGC
NAQVTYSLLP
CBL_PTK
0.6028
p.T476I
DO229221
THCA
ICGC
NAQVTYSLLP
CBL_PTK
0.1389
p.P493S
SIDM00598
Squamous Cell Lung Carcinoma
GDSC
NAQVTYSLLP
CBL_PTK
0.3056
p.P493S
ACH-000843
Lung Cancer
CCLE
NAQVTYSLLP
CBL_PTK
0.3056
p.P493S
HARA
lung
COSMIC
NAQVTYSLLP
CBL_PTK
0.3056
p.A475P
SIDM00719
Small Cell Lung Carcinoma
GDSC
NAQVTYSLLP
CBL_PTK
0.1111
p.A475P
ACH-001364
Lung Cancer
CCLE
NAQVTYSLLP
CBL_PTK
0.1111
p.A475P
NCI-H345
lung
COSMIC
NAQVTYSLLP
CBL_PTK
0.1111
p.T476K
SIDM00364
B-Lymphoblastic Leukemia
GDSC
NAQVTYSLLP
CBL_PTK
0.1389
p.T476K
ACH-002059
Leukemia
CCLE
NAQVTYSLLP
CBL_PTK
0.1389
p.T476K
P30-OHK
haematopoietic_and_lymphoid_tissue
COSMIC
NAQVTYSLLP
CBL_PTK
0.1389
p.T501I
SIDM00251
Gastric Carcinoma
GDSC
NAQVTYSLLP
CBL_PTK
0.0833
p.T501I
ACH-000949
Gastric Cancer
CCLE
NAQVTYSLLP
CBL_PTK
0.0833
p.T501I
TGBC11TKB
stomach
COSMIC
NAQVTYSLLP
CBL_PTK
0.0833
Drug responses associated with PCDHB13 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of NAQVTYSLLP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y5F0
Protocadherin beta-13
CBL_PTK
483:492
NAQVTYSLLP
CBL
0.7162
More...