DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
NRPSLAELP
Uniprot ID:
Q9Y572
Source protein:
Receptor-interacting serine/threonine-protein kinase 3
Source gene:
RIPK3
Class:
DEG_APCC_DBOX_1
Location:
238:246
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8986
ASA_SCORE:
60.4889
COIL:
0.8107
CONS_SCORE:
0.3784
DSS_SCORE:
0.5031
HELIX:
0.1328
FCONS_SCORE:
1.0281
RIG_SCORE:
0.7021
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R239W
TCGA-AX-A3FT
UCEC
TCGA
NRPSLAELP
DEG_APCC_DBOX_1
0.8634
p.R239W
DO40801
UCEC
ICGC
NRPSLAELP
DEG_APCC_DBOX_1
0.8634
p.Q237K
TCGA-D8-A1XK
BRCA
TCGA
NRPSLAELP
DEG_APCC_DBOX_1
0.3056
p.Q237K
DO4749
BRCA
ICGC
NRPSLAELP
DEG_APCC_DBOX_1
0.3056
p.E231K
TCGA-F5-6814
READ
TCGA
NRPSLAELP
DEG_APCC_DBOX_1
0.1389
p.E231K
DO36556
READ
ICGC
NRPSLAELP
DEG_APCC_DBOX_1
0.1389
p.R239Q
SIDM02049
Pancreatic Carcinoma
GDSC
NRPSLAELP
DEG_APCC_DBOX_1
0.7329
p.R239Q
SIDM00454
Rhabdomyosarcoma
GDSC
NRPSLAELP
DEG_APCC_DBOX_1
0.7329
Drug responses associated with RIPK3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of NRPSLAELP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y572
Receptor-interacting serine/threonine-protein kinase 3
DEG_APCC_DBOX_1
238:246
NRPSLAELP
APC,CDC20,FZR1
0.8986
More...