DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PITPVYT
Uniprot ID:
A0AV96
Source protein:
RNA-binding protein 47
Source gene:
RBM47
Class:
DEG_SCF_FBW7_1
Location:
517:523
E3 ligase:
FBXW7
DEGRON score:
0.9127
ASA_SCORE:
79.7
COIL:
0.9047
CONS_SCORE:
0.5547
DSS_SCORE:
0.3194
HELIX:
0.0133
FCONS_SCORE:
1.031
RIG_SCORE:
0.8087
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S508L
TCGA-AP-A1E0
UCEC
TCGA
PITPVYT
DEG_SCF_FBW7_1
0.5278
p.P517Q
TCGA-D3-A2JO
SKCM
TCGA
PITPVYT
DEG_SCF_FBW7_1
0.7035
p.P532S
TCGA-EE-A2MJ
SKCM
TCGA
PITPVYT
DEG_SCF_FBW7_1
0.0833
p.M527V
DO227999
COCA
ICGC
PITPVYT
DEG_SCF_FBW7_1
0.2222
p.M527V
DO229010
COCA
ICGC
PITPVYT
DEG_SCF_FBW7_1
0.2222
p.M527V
DO229013
COCA
ICGC
PITPVYT
DEG_SCF_FBW7_1
0.2222
p.M527V
DO229016
COCA
ICGC
PITPVYT
DEG_SCF_FBW7_1
0.2222
p.M527V
DO229003
COCA
ICGC
PITPVYT
DEG_SCF_FBW7_1
0.2222
p.M527V
DO228957
LICA
ICGC
PITPVYT
DEG_SCF_FBW7_1
0.2222
p.A515T
DO234214
ESAD
ICGC
PITPVYT
DEG_SCF_FBW7_1
0.2778
p.M527I
DO233097
GACA
ICGC
PITPVYT
DEG_SCF_FBW7_1
0.2222
p.P509S
DO44429
HNSC
ICGC
PITPVYT
DEG_SCF_FBW7_1
0.1111
p.T511K
DO228972
LICA
ICGC
PITPVYT
DEG_SCF_FBW7_1
0.1667
p.A532T
DO23390
LINC
ICGC
PITPVYT
DEG_SCF_FBW7_1
0.0833
p.G529R
DO45145
LIRI
ICGC
PITPVYT
DEG_SCF_FBW7_1
0.1667
p.A515S
DO230541
LUSC
ICGC
PITPVYT
DEG_SCF_FBW7_1
0.2778
p.Q518R
DO233298
NACA
ICGC
PITPVYT
DEG_SCF_FBW7_1
0.7329
p.G530E
DO229502
SKCA
ICGC
PITPVYT
DEG_SCF_FBW7_1
0.1389
p.N520S
DO38487
STAD
ICGC
PITPVYT
DEG_SCF_FBW7_1
0.7069
p.A524T
DO48016
STAD
ICGC
PITPVYT
DEG_SCF_FBW7_1
0.3056
p.A521V
DO229211
THCA
ICGC
PITPVYT
DEG_SCF_FBW7_1
0.6936
p.T513M
DO43186
UCEC
ICGC
PITPVYT
DEG_SCF_FBW7_1
0.2222
p.A508D
DO43819
UCEC
ICGC
PITPVYT
DEG_SCF_FBW7_1
0.5278
p.P511S
SIDM00770
Small Cell Lung Carcinoma
GDSC
PITPVYT
DEG_SCF_FBW7_1
0.1667
p.P511S
ACH-000559
Lung Cancer
CCLE
PITPVYT
DEG_SCF_FBW7_1
0.1667
p.P511S
NCI-H1836
lung
COSMIC
PITPVYT
DEG_SCF_FBW7_1
0.1667
p.T533A
SIDM00466
Ovarian Carcinoma
GDSC
PITPVYT
DEG_SCF_FBW7_1
0.5
p.T533A
SIDM00235
Kidney Carcinoma
GDSC
PITPVYT
DEG_SCF_FBW7_1
0.5
p.T533A
SIDM00488
Colorectal Carcinoma
GDSC
PITPVYT
DEG_SCF_FBW7_1
0.5
p.T533A
SIDM01377
Ovarian Carcinoma
GDSC
PITPVYT
DEG_SCF_FBW7_1
0.5
p.A525D
SIDM00217
Colorectal Carcinoma
GDSC
PITPVYT
DEG_SCF_FBW7_1
0.2778
p.A525D
ACH-000999
Colon/Colorectal Cancer
CCLE
PITPVYT
DEG_SCF_FBW7_1
0.2778
p.A525D
SNU-1040
large_intestine
COSMIC
PITPVYT
DEG_SCF_FBW7_1
0.2778
p.T509M
SIDM00861
Ovarian Carcinoma
GDSC
PITPVYT
DEG_SCF_FBW7_1
0.1111
p.T509M
ACH-000906
Ovarian Cancer
CCLE
PITPVYT
DEG_SCF_FBW7_1
0.1111
p.T509M
ES-2
ovary
COSMIC
PITPVYT
DEG_SCF_FBW7_1
0.1111
p.A524V
C-33-A
cervix
COSMIC
PITPVYT
DEG_SCF_FBW7_1
0.3056
Drug responses associated with RBM47 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PITPVYT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A0AV96
RNA-binding protein 47
DEG_SCF_FBW7_1
517:523
PITPVYT
FBXW7
0.9127
More...