DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PLTPSSS
Uniprot ID:
P10826
Source protein:
Retinoic acid receptor beta
Source gene:
RARB
Class:
DEG_SCF_FBW7_1
Location:
422:428
E3 ligase:
FBXW7
DEGRON score:
0.9408
ASA_SCORE:
85.7143
COIL:
0.9559
CONS_SCORE:
0.1993
DSS_SCORE:
0.7865
HELIX:
0.0277
FCONS_SCORE:
0.6532
RIG_SCORE:
0.5437
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N423I
TCGA-A8-A081
BRCA
TCGA
PLTPSSS
DEG_SCF_FBW7_1
0.728
p.E437Q
TCGA-DK-AA71
BLCA
TCGA
PLTPSSS
DEG_SCF_FBW7_1
0.0833
p.N430I
DO2943
BRCA
ICGC
PLTPSSS
DEG_SCF_FBW7_1
0.2778
p.T424I
SIDM00845
Burkitt's Lymphoma
GDSC
PLTPSSS
DEG_SCF_FBW7_1
0.7078
p.T424I
SIDM00461
Acute Myeloid Leukemia
GDSC
PLTPSSS
DEG_SCF_FBW7_1
0.7078
p.T424I
SIDM01519
Head and Neck Carcinoma
GDSC
PLTPSSS
DEG_SCF_FBW7_1
0.7078
p.T424I
ACH-000786
Lymphoma
CCLE
PLTPSSS
DEG_SCF_FBW7_1
0.7078
Drug responses associated with RARB mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PLTPSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P10826
Retinoic acid receptor beta
DEG_SCF_FBW7_1
422:428
PLTPSSS
FBXW7
0.9408
More...