DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PPETPGAE
Uniprot ID:
Q13127
Source protein:
RE1-silencing transcription factor
Source gene:
REST
Class:
DEG_SCF_FBW7_2
Location:
141:148
E3 ligase:
FBXW7
DEGRON score:
0.6379
ASA_SCORE:
86.35
COIL:
0.8198
CONS_SCORE:
0.5088
DSS_SCORE:
0.7009
HELIX:
0.1309
FCONS_SCORE:
1.0595
RIG_SCORE:
0.589
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K155N
TCGA-06-5416
GBM
TCGA
PPETPGAE
DEG_SCF_FBW7_2
0.25
p.K155N
DO10880
GBM
ICGC
PPETPGAE
DEG_SCF_FBW7_2
0.25
p.A147T
TCGA-A5-A0G1
UCEC
TCGA
PPETPGAE
DEG_SCF_FBW7_2
0.6028
p.A147T
DO42472
UCEC
ICGC
PPETPGAE
DEG_SCF_FBW7_2
0.6028
p.D139N
TCGA-A5-A0G2
UCEC
TCGA
PPETPGAE
DEG_SCF_FBW7_2
0.2778
p.D139N
DO41235
UCEC
ICGC
PPETPGAE
DEG_SCF_FBW7_2
0.2778
p.D149G
TCGA-CG-5721
STAD
TCGA
PPETPGAE
DEG_SCF_FBW7_2
0.3056
p.D149G
DO38192
STAD
ICGC
PPETPGAE
DEG_SCF_FBW7_2
0.3056
p.P141S
TCGA-EE-A2MJ
SKCM
TCGA
PPETPGAE
DEG_SCF_FBW7_2
0.6752
p.P141S
DO38099
SKCM
ICGC
PPETPGAE
DEG_SCF_FBW7_2
0.6752
p.K152T
TCGA-EO-A3AY
UCEC
TCGA
PPETPGAE
DEG_SCF_FBW7_2
0.3333
p.K152T
DO43202
UCEC
ICGC
PPETPGAE
DEG_SCF_FBW7_2
0.3333
p.G151D
DO229018
LICA
ICGC
PPETPGAE
DEG_SCF_FBW7_2
0.25
p.P141R
SIDM00944
Colorectal Carcinoma
GDSC
PPETPGAE
DEG_SCF_FBW7_2
0.7512
p.P141R
CL-11
large_intestine
COSMIC
PPETPGAE
DEG_SCF_FBW7_2
0.7512
p.D132H
SIDM00420
Bladder Carcinoma
GDSC
PPETPGAE
DEG_SCF_FBW7_2
0.0833
p.D132H
ACH-000566
Bladder Cancer
CCLE
PPETPGAE
DEG_SCF_FBW7_2
0.0833
p.D132H
SW1710
urinary_tract
COSMIC
PPETPGAE
DEG_SCF_FBW7_2
0.0833
p.S154L
ACH-000999
Colon/Colorectal Cancer
CCLE
PPETPGAE
DEG_SCF_FBW7_2
0.1667
Drug responses associated with REST mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPETPGAE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13127
RE1-silencing transcription factor
DEG_SCF_FBW7_2
141:148
PPETPGAE
FBXW7
0.6379
More...