DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PPPASVSPQ
Uniprot ID:
Q9NQC3
Source protein:
Reticulon-4
Source gene:
RTN4
Class:
DEG_SIAH_1
Location:
146:154
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.993
ASA_SCORE:
95.8667
COIL:
0.9614
CONS_SCORE:
0.6174
DSS_SCORE:
0.7408
HELIX:
0.0187
FCONS_SCORE:
0.9963
RIG_SCORE:
0.477
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.M148V
DO8264
COAD
ICGC
PPPASVSPQ
DEG_SIAH_1
0.7208
p.P147A
DO25867
LUAD
ICGC
PPPASVSPQ
DEG_SIAH_1
0.7503
p.D161V
DO51407
PRAD
ICGC
PPPASVSPQ
DEG_SIAH_1
0.1389
p.S150R
DO229211
THCA
ICGC
PPPASVSPQ
DEG_SIAH_1
0.6316
p.P146S
ACH-000987
Skin Cancer
CCLE
PPPASVSPQ
DEG_SIAH_1
0.5641
p.V151A
ACH-000990
Endometrial/Uterine Cancer
CCLE
PPPASVSPQ
DEG_SIAH_1
0.6936
p.P146H
ACH-000998
Colon/Colorectal Cancer
CCLE
PPPASVSPQ
DEG_SIAH_1
0.6583
Drug responses associated with RTN4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPPASVSPQ
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NQC3
Reticulon-4
DEG_SIAH_1
146:154
PPPASVSPQ
SIAH1,SIAH2,SIAH3
0.993
More...