DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PPSALVKPN
Uniprot ID:
Q5JUQ0
Source protein:
Protein FAM78A
Source gene:
FAM78A
Class:
DEG_SIAH_1
Location:
250:258
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.7782
ASA_SCORE:
54.9889
COIL:
0.6351
CONS_SCORE:
0.7802
DSS_SCORE:
0.5065
HELIX:
0.3384
FCONS_SCORE:
1.0034
RIG_SCORE:
0.695
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K245N
TCGA-AG-A002
READ
TCGA
PPSALVKPN
DEG_SIAH_1
0.3056
p.P250L
TCGA-AX-A3FT
UCEC
TCGA
PPSALVKPN
DEG_SIAH_1
0.6471
p.P250L
DO40801
UCEC
ICGC
PPSALVKPN
DEG_SIAH_1
0.6471
p.P250S
TCGA-CV-7568
HNSC
TCGA
PPSALVKPN
DEG_SIAH_1
0.5641
p.P250S
TCGA-E8-A2JQ
THCA
TCGA
PPSALVKPN
DEG_SIAH_1
0.5641
p.I242L
TCGA-GV-A3QK
BLCA
TCGA
PPSALVKPN
DEG_SIAH_1
0.1111
p.L262F
DO1071
BRCA
ICGC
PPSALVKPN
DEG_SIAH_1
0.2222
p.P247S
DO14160
HNSC
ICGC
PPSALVKPN
DEG_SIAH_1
0.25
p.P247S
DO39511
THCA
ICGC
PPSALVKPN
DEG_SIAH_1
0.25
p.S241I
DO228252
LICA
ICGC
PPSALVKPN
DEG_SIAH_1
0.5278
p.D258N
DO228390
LICA
ICGC
PPSALVKPN
DEG_SIAH_1
0.6932
p.I249T
DO232761
PBCA
ICGC
PPSALVKPN
DEG_SIAH_1
0.3056
p.Q263H
SIDM00429
B-Lymphoblastic Leukemia
GDSC
PPSALVKPN
DEG_SIAH_1
0.1944
p.Q263H
ACH-000938
Leukemia
CCLE
PPSALVKPN
DEG_SIAH_1
0.1944
p.Q263H
NALM-6
haematopoietic_and_lymphoid_tissue
COSMIC
PPSALVKPN
DEG_SIAH_1
0.1944
p.S252N
SIDM01664
Prostate Carcinoma
GDSC
PPSALVKPN
DEG_SIAH_1
0.5958
p.S252N
ACH-000952
Prostate Cancer
CCLE
PPSALVKPN
DEG_SIAH_1
0.5958
p.Q260H
NALM-6
haematopoietic_and_lymphoid_tissue
COSMIC
PPSALVKPN
DEG_SIAH_1
0.2778
p.P266L
ME-180
cervix
COSMIC
PPSALVKPN
DEG_SIAH_1
0.1111
Drug responses associated with FAM78A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPSALVKPN
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5JUQ0
Protein FAM78A
DEG_SIAH_1
250:258
PPSALVKPN
SIAH1,SIAH2,SIAH3
0.7782
More...