DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRKFLRSVG
Uniprot ID:
Q9Y2T7
Source protein:
Y-box-binding protein 2
Source gene:
YBX2
Class:
DEG_APCC_DBOX_1
Location:
131:139
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6931
ASA_SCORE:
67.9333
COIL:
0.5644
CONS_SCORE:
0.6319
DSS_SCORE:
0.4238
HELIX:
0.0408
FCONS_SCORE:
0.8446
RIG_SCORE:
0.7576
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E145A
TCGA-2W-A8YY
CESC
TCGA
PRKFLRSVG
DEG_APCC_DBOX_1
0.1667
p.E145A
DO223732
CESC
ICGC
PRKFLRSVG
DEG_APCC_DBOX_1
0.1667
p.V138A
TCGA-41-2575
GBM
TCGA
PRKFLRSVG
DEG_APCC_DBOX_1
0.6936
p.V138A
DO10874
GBM
ICGC
PRKFLRSVG
DEG_APCC_DBOX_1
0.6936
p.S137C
TCGA-86-7714
LUAD
TCGA
PRKFLRSVG
DEG_APCC_DBOX_1
0.7541
p.S137C
DO24870
LUAD
ICGC
PRKFLRSVG
DEG_APCC_DBOX_1
0.7541
p.R136H
TCGA-AA-A010
COAD
TCGA
PRKFLRSVG
DEG_APCC_DBOX_1
0.7133
p.R136H
ACH-001518
Endometrial/Uterine Cancer
CCLE
PRKFLRSVG
DEG_APCC_DBOX_1
0.7133
p.K133T
TCGA-BK-A6W3
UCEC
TCGA
PRKFLRSVG
DEG_APCC_DBOX_1
0.6195
p.K133T
DO50076
UCEC
ICGC
PRKFLRSVG
DEG_APCC_DBOX_1
0.6195
p.P131H
TCGA-EC-A24G
UCEC
TCGA
PRKFLRSVG
DEG_APCC_DBOX_1
0.6583
p.P131H
DO40996
UCEC
ICGC
PRKFLRSVG
DEG_APCC_DBOX_1
0.6583
p.Q123H
TCGA-IB-7651
PAAD
TCGA
PRKFLRSVG
DEG_APCC_DBOX_1
0.1111
p.R136C
DO233272
GACA
ICGC
PRKFLRSVG
DEG_APCC_DBOX_1
0.719
p.R128K
DO228974
LICA
ICGC
PRKFLRSVG
DEG_APCC_DBOX_1
0.25
p.N130K
DO229041
LICA
ICGC
PRKFLRSVG
DEG_APCC_DBOX_1
0.3056
p.V121I
SIDM00773
Non-Cancerous
GDSC
PRKFLRSVG
DEG_APCC_DBOX_1
0.0556
p.V121I
ACH-002381
Non-Cancerous
CCLE
PRKFLRSVG
DEG_APCC_DBOX_1
0.0556
p.V149M
SIDM00217
Colorectal Carcinoma
GDSC
PRKFLRSVG
DEG_APCC_DBOX_1
0.0556
p.V149M
ACH-000999
Colon/Colorectal Cancer
CCLE
PRKFLRSVG
DEG_APCC_DBOX_1
0.0556
p.V149M
SNU-1040
large_intestine
COSMIC
PRKFLRSVG
DEG_APCC_DBOX_1
0.0556
p.A125D
SIDM01150
Non-Small Cell Lung Carcinoma
GDSC
PRKFLRSVG
DEG_APCC_DBOX_1
0.1667
p.A125D
ACH-000416
Lung Cancer
CCLE
PRKFLRSVG
DEG_APCC_DBOX_1
0.1667
p.A125D
NCI-H838
lung
COSMIC
PRKFLRSVG
DEG_APCC_DBOX_1
0.1667
Drug responses associated with YBX2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRKFLRSVG
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y2T7
Y-box-binding protein 2
DEG_APCC_DBOX_1
131:139
PRKFLRSVG
APC,CDC20,FZR1
0.6931
More...