DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PRLLLLPLL
Uniprot ID:
P09564
Source protein:
T-cell antigen CD7
Source gene:
CD7
Class:
DEG_APCC_DBOX_1
Location:
5:13
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7477
ASA_SCORE:
68.4111
COIL:
0.184
CONS_SCORE:
0.58
DSS_SCORE:
0.1339
HELIX:
0.815
FCONS_SCORE:
1.3479
RIG_SCORE:
0.884
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L14V
TCGA-AX-A2IO
UCEC
TCGA
PRLLLLPLL
DEG_APCC_DBOX_1
0.3056
p.G3R
TCGA-DD-AADW
LIHC
TCGA
PRLLLLPLL
DEG_APCC_DBOX_1
0.2778
p.G3R
DO52249
LIHC
ICGC
PRLLLLPLL
DEG_APCC_DBOX_1
0.2778
p.P5L
TCGA-GN-A4U3
SKCM
TCGA
PRLLLLPLL
DEG_APCC_DBOX_1
0.6471
p.R3C
DO9346
COAD
ICGC
PRLLLLPLL
DEG_APCC_DBOX_1
0.2778
p.R3H
DO12328
GBM
ICGC
PRLLLLPLL
DEG_APCC_DBOX_1
0.2778
p.Y23N
DO220895
MELA
ICGC
PRLLLLPLL
DEG_APCC_DBOX_1
0.0556
p.S7L
DO50422
PRAD
ICGC
PRLLLLPLL
DEG_APCC_DBOX_1
0.7667
p.L7P
DO229257
THCA
ICGC
PRLLLLPLL
DEG_APCC_DBOX_1
0.6471
p.G19C
SIDM00541
Colorectal Carcinoma
GDSC
PRLLLLPLL
DEG_APCC_DBOX_1
0.1667
Drug responses associated with CD7 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRLLLLPLL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P09564
T-cell antigen CD7
DEG_APCC_DBOX_1
5:13
PRLLLLPLL
APC,CDC20,FZR1
0.7477
More...