DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
PRNVLTRMP
Uniprot ID:
P83369
Source protein:
U7 snRNA-associated Sm-like protein LSm11
Source gene:
LSM11
Class:
DEG_APCC_DBOX_1
Location:
141:149
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.987
ASA_SCORE:
81.9889
COIL:
0.6813
CONS_SCORE:
0.5863
DSS_SCORE:
0.6236
HELIX:
0.1813
FCONS_SCORE:
1.0923
RIG_SCORE:
0.702
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G157C
TCGA-AX-A060
UCEC
TCGA
PRNVLTRMP
DEG_APCC_DBOX_1
0.1111
p.G157C
DO42576
UCEC
ICGC
PRNVLTRMP
DEG_APCC_DBOX_1
0.1111
p.P155T
DO228757
PRAD
ICGC
PRNVLTRMP
DEG_APCC_DBOX_1
0.1667
Drug responses associated with LSM11 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRNVLTRMP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P83369
U7 snRNA-associated Sm-like protein LSm11
DEG_APCC_DBOX_1
141:149
PRNVLTRMP
APC,CDC20,FZR1
0.987
More...