DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRTPVGS
Uniprot ID:
P0DI83
Source protein:
Ras-related protein Rab-34, isoform NARR
Source gene:
RAB34
Class:
DEG_SCF_FBW7_1
Location:
99:105
E3 ligase:
FBXW7
DEGRON score:
0.9984
ASA_SCORE:
78.1143
COIL:
0.8654
CONS_SCORE:
0
DSS_SCORE:
0.3674
HELIX:
0.0161
FCONS_SCORE:
0
RIG_SCORE:
0.6475
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K111N
TCGA-CD-A4MG
STAD
TCGA
PRTPVGS
DEG_SCF_FBW7_1
0.1667
p.K111N
TCGA-D5-6928
COAD
TCGA
PRTPVGS
DEG_SCF_FBW7_1
0.1667
p.R93Q
DO8778
COAD
ICGC
PRTPVGS
DEG_SCF_FBW7_1
0.1667
p.W106L
DO8447
COAD
ICGC
PRTPVGS
DEG_SCF_FBW7_1
0.3056
p.G110V
DO222503
COCA
ICGC
PRTPVGS
DEG_SCF_FBW7_1
0.1944
p.P100T
DO228952
LICA
ICGC
PRTPVGS
DEG_SCF_FBW7_1
0.7031
p.L97M
DO229037
LICA
ICGC
PRTPVGS
DEG_SCF_FBW7_1
0.2778
p.G98C
DO230937
LUSC
ICGC
PRTPVGS
DEG_SCF_FBW7_1
0.3056
p.G98C
DO224619
LUSC
ICGC
PRTPVGS
DEG_SCF_FBW7_1
0.3056
p.E95Q
DO27081
LUSC
ICGC
PRTPVGS
DEG_SCF_FBW7_1
0.2222
p.A109T
DO38723
STAD
ICGC
PRTPVGS
DEG_SCF_FBW7_1
0.2222
p.S111T
SIDM00217
Colorectal Carcinoma
GDSC
PRTPVGS
DEG_SCF_FBW7_1
0.1667
p.S111T
SNU-1040
large_intestine
COSMIC
PRTPVGS
DEG_SCF_FBW7_1
0.1667
p.R92H
SIDM00951
T-Lymphoblastic Leukemia
GDSC
PRTPVGS
DEG_SCF_FBW7_1
0.1389
p.R92H
CTV-1
haematopoietic_and_lymphoid_tissue
COSMIC
PRTPVGS
DEG_SCF_FBW7_1
0.1389
p.A96T
SIDM01770
Gastric Carcinoma
GDSC
PRTPVGS
DEG_SCF_FBW7_1
0.6944
p.G110R
ACH-001061
Colon/Colorectal Cancer
CCLE
PRTPVGS
DEG_SCF_FBW7_1
0.1944
p.L103V
ACH-001136
Lung Cancer
CCLE
PRTPVGS
DEG_SCF_FBW7_1
0.6765
p.L103V
NCI-H187
lung
COSMIC
PRTPVGS
DEG_SCF_FBW7_1
0.6765
p.G110W
ACH-002017
Eye Cancer
CCLE
PRTPVGS
DEG_SCF_FBW7_1
0.1944
p.L104V
NCI-H187
lung
COSMIC
PRTPVGS
DEG_SCF_FBW7_1
0.6765
p.G102E
AU565
breast
COSMIC
PRTPVGS
DEG_SCF_FBW7_1
0.7199
p.A105S
LoVo
large_intestine
COSMIC
PRTPVGS
DEG_SCF_FBW7_1
0.7588
Drug responses associated with RAB34 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRTPVGS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P0DI83
Ras-related protein Rab-34, isoform NARR
DEG_SCF_FBW7_1
99:105
PRTPVGS
FBXW7
0.9984
More...
Q9Y2I7
1-phosphatidylinositol 3-phosphate 5-kinase
DEG_SCF_FBW7_1
251:257
PRTPVGS
FBXW7
0.7907
More...