DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PSDTPEGE
Uniprot ID:
Q9NW08
Source protein:
DNA-directed RNA polymerase III subunit RPC2
Source gene:
POLR3B
Class:
DEG_SCF_FBW7_2
Location:
481:488
E3 ligase:
FBXW7
DEGRON score:
0.5791
ASA_SCORE:
60.825
COIL:
0.8403
CONS_SCORE:
0.8014
DSS_SCORE:
0.3694
HELIX:
0.0835
FCONS_SCORE:
1.1654
RIG_SCORE:
0.7002
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D483N
TCGA-06-0213
GBM
TCGA
PSDTPEGE
DEG_SCF_FBW7_2
0.5821
p.P481S
TCGA-EE-A2MJ
SKCM
TCGA
PSDTPEGE
DEG_SCF_FBW7_2
0.6752
p.P481L
TCGA-EE-A2MJ
SKCM
TCGA
PSDTPEGE
DEG_SCF_FBW7_2
0.6471
p.P481L
TCGA-GN-A8LK
SKCM
TCGA
PSDTPEGE
DEG_SCF_FBW7_2
0.6471
p.P481L
SIDM01029
Esophageal Squamous Cell Carcinoma
GDSC
PSDTPEGE
DEG_SCF_FBW7_2
0.6471
p.P481R
TCGA-EE-A3AG
SKCM
TCGA
PSDTPEGE
DEG_SCF_FBW7_2
0.7512
p.N477S
DO26822
LUSC
ICGC
PSDTPEGE
DEG_SCF_FBW7_2
0.2222
p.R492Q
DO232224
PBCA
ICGC
PSDTPEGE
DEG_SCF_FBW7_2
0.2222
p.V498L
DO219491
SKCM
ICGC
PSDTPEGE
DEG_SCF_FBW7_2
0.0556
p.N477H
DO43186
UCEC
ICGC
PSDTPEGE
DEG_SCF_FBW7_2
0.2222
p.N486T
DO43971
UCEC
ICGC
PSDTPEGE
DEG_SCF_FBW7_2
0.7055
p.A489T
SIDM01032
Esophageal Squamous Cell Carcinoma
GDSC
PSDTPEGE
DEG_SCF_FBW7_2
0.3056
p.A489T
KYSE-140
oesophagus
COSMIC
PSDTPEGE
DEG_SCF_FBW7_2
0.3056
p.S482L
ACH-002089
Lung Cancer
CCLE
PSDTPEGE
DEG_SCF_FBW7_2
0.6556
p.S482L
201T
lung
COSMIC
PSDTPEGE
DEG_SCF_FBW7_2
0.6556
Drug responses associated with POLR3B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PSDTPEGE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NW08
DNA-directed RNA polymerase III subunit RPC2
DEG_SCF_FBW7_2
481:488
PSDTPEGE
FBXW7
0.5791
More...