DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPDGS
Uniprot ID:
Q96MU7
Source protein:
YTH domain-containing protein 1
Source gene:
YTHDC1
Class:
DEG_SCF_FBW7_1
Location:
147:152
E3 ligase:
FBXW7
DEGRON score:
0.8684
ASA_SCORE:
85.7667
COIL:
0.9455
CONS_SCORE:
0.357
DSS_SCORE:
0.7184
HELIX:
0.0405
FCONS_SCORE:
0.9541
RIG_SCORE:
0.5659
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R162H
TCGA-AN-A0AK
BRCA
TCGA
PTPDGS
DEG_SCF_FBW7_1
0.0556
p.R162H
DO1608
BRCA
ICGC
PTPDGS
DEG_SCF_FBW7_1
0.0556
p.R154I
TCGA-BS-A0UV
UCEC
TCGA
PTPDGS
DEG_SCF_FBW7_1
0.2778
p.R154I
TCGA-D3-A2JP
SKCM
TCGA
PTPDGS
DEG_SCF_FBW7_1
0.2778
p.R154I
DO222762
COCA
ICGC
PTPDGS
DEG_SCF_FBW7_1
0.2778
p.R154I
DO47407
SKCM
ICGC
PTPDGS
DEG_SCF_FBW7_1
0.2778
p.R154I
DO42793
UCEC
ICGC
PTPDGS
DEG_SCF_FBW7_1
0.2778
p.E141K
TCGA-EA-A43B
CESC
TCGA
PTPDGS
DEG_SCF_FBW7_1
0.1667
p.E141K
DO44384
CESC
ICGC
PTPDGS
DEG_SCF_FBW7_1
0.1667
p.E153A
TCGA-EV-5902
KIRP
TCGA
PTPDGS
DEG_SCF_FBW7_1
0.3056
p.E153A
DO20875
KIRP
ICGC
PTPDGS
DEG_SCF_FBW7_1
0.3056
p.R162C
SIDM01141
Ovarian Carcinoma
GDSC
PTPDGS
DEG_SCF_FBW7_1
0.0556
p.R162C
ACH-000291
Ovarian Cancer
CCLE
PTPDGS
DEG_SCF_FBW7_1
0.0556
p.D150N
SIDM01145
Gastric Carcinoma
GDSC
PTPDGS
DEG_SCF_FBW7_1
0.5821
p.D150N
SIDM00658
Non-Small Cell Lung Carcinoma
GDSC
PTPDGS
DEG_SCF_FBW7_1
0.5821
p.P147S
ACH-000588
Myeloma
CCLE
PTPDGS
DEG_SCF_FBW7_1
0.6752
Drug responses associated with YTHDC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPDGS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96MU7
YTH domain-containing protein 1
DEG_SCF_FBW7_1
147:152
PTPDGS
FBXW7
0.8684
More...