DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PTPGCS
Uniprot ID:
Q8WW01
Source protein:
tRNA-splicing endonuclease subunit Sen15
Source gene:
TSEN15
Class:
DEG_SCF_FBW7_1
Location:
9:14
E3 ligase:
FBXW7
DEGRON score:
0.9984
ASA_SCORE:
71.3833
COIL:
0.9417
CONS_SCORE:
0.7967
DSS_SCORE:
0.7619
HELIX:
0.0272
FCONS_SCORE:
1.0513
RIG_SCORE:
0.5957
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R22H
TCGA-BS-A0UV
UCEC
TCGA
PTPGCS
DEG_SCF_FBW7_1
0.1111
p.R22H
DO42793
UCEC
ICGC
PTPGCS
DEG_SCF_FBW7_1
0.1111
p.G19D
DO229010
COCA
ICGC
PTPGCS
DEG_SCF_FBW7_1
0.1944
p.G19D
DO229013
COCA
ICGC
PTPGCS
DEG_SCF_FBW7_1
0.1944
p.G19D
DO229016
COCA
ICGC
PTPGCS
DEG_SCF_FBW7_1
0.1944
p.G19D
DO229005
COCA
ICGC
PTPGCS
DEG_SCF_FBW7_1
0.1944
p.G19D
DO229346
LAML
ICGC
PTPGCS
DEG_SCF_FBW7_1
0.1944
p.G19D
DO228941
LICA
ICGC
PTPGCS
DEG_SCF_FBW7_1
0.1944
p.G19D
DO230999
LUSC
ICGC
PTPGCS
DEG_SCF_FBW7_1
0.1944
p.G19D
DO231043
LUSC
ICGC
PTPGCS
DEG_SCF_FBW7_1
0.1944
p.C13F
DO228952
LICA
ICGC
PTPGCS
DEG_SCF_FBW7_1
0.5996
p.T10I
SIDM00087
Plasma Cell Myeloma
GDSC
PTPGCS
DEG_SCF_FBW7_1
0.8189
p.T10I
ACH-000817
Myeloma
CCLE
PTPGCS
DEG_SCF_FBW7_1
0.8189
p.R4C
ACH-001494
Bile Duct Cancer
CCLE
PTPGCS
DEG_SCF_FBW7_1
0.1944
Drug responses associated with TSEN15 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTPGCS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8WW01
tRNA-splicing endonuclease subunit Sen15
DEG_SCF_FBW7_1
9:14
PTPGCS
FBXW7
0.9984
More...