DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RARVYTD
Uniprot ID:
P68400
Source protein:
Casein kinase II subunit alpha
Source gene:
CSNK2A1
Class:
LIG_APCC_ABBAyCdc20_2
Location:
8:14
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9923
ASA_SCORE:
86.2143
COIL:
0.6107
CONS_SCORE:
0.6733
DSS_SCORE:
0.4801
HELIX:
0.2676
FCONS_SCORE:
1.2498
RIG_SCORE:
0.7515
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E22Q
TCGA-85-A4CL
LUSC
TCGA
RARVYTD
LIG_APCC_ABBAyCdc20_2
0.1111
p.E22Q
DO45454
LUSC
ICGC
RARVYTD
LIG_APCC_ABBAyCdc20_2
0.1111
p.A9D
TCGA-HU-A4GU
STAD
TCGA
RARVYTD
LIG_APCC_ABBAyCdc20_2
0.6682
p.A9D
DO47849
STAD
ICGC
RARVYTD
LIG_APCC_ABBAyCdc20_2
0.6682
p.H18Q
DO228974
LICA
ICGC
RARVYTD
LIG_APCC_ABBAyCdc20_2
0.2222
p.D9E
DO41199
UCEC
ICGC
RARVYTD
LIG_APCC_ABBAyCdc20_2
0.6758
p.T13I
SIDM01016
T-Lymphoblastic Leukemia
GDSC
RARVYTD
LIG_APCC_ABBAyCdc20_2
0.7078
p.T13I
SIDM01263
T-Lymphoblastic Leukemia
GDSC
RARVYTD
LIG_APCC_ABBAyCdc20_2
0.7078
p.T13I
ACH-000995
Leukemia
CCLE
RARVYTD
LIG_APCC_ABBAyCdc20_2
0.7078
p.T13I
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
RARVYTD
LIG_APCC_ABBAyCdc20_2
0.7078
p.R21G
SIDM00771
Non-Small Cell Lung Carcinoma
GDSC
RARVYTD
LIG_APCC_ABBAyCdc20_2
0.1389
p.R21G
ACH-000496
Lung Cancer
CCLE
RARVYTD
LIG_APCC_ABBAyCdc20_2
0.1389
p.R21G
NCI-H1792
lung
COSMIC
RARVYTD
LIG_APCC_ABBAyCdc20_2
0.1389
Drug responses associated with CSNK2A1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RARVYTD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P68400
Casein kinase II subunit alpha
LIG_APCC_ABBAyCdc20_2
8:14
RARVYTD
APC,CDC20,FZR1
0.9923
More...