DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
RDSLYAE
Uniprot ID:
P35398
Source protein:
Nuclear receptor ROR-alpha
Source gene:
RORA
Class:
LIG_APCC_ABBAyCdc20_2
Location:
153:159
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8425
ASA_SCORE:
94.6429
COIL:
0.3469
CONS_SCORE:
0.6878
DSS_SCORE:
0.619
HELIX:
0.6379
FCONS_SCORE:
1.0349
RIG_SCORE:
0.7264
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V169I
TCGA-55-A492
LUAD
TCGA
RDSLYAE
LIG_APCC_ABBAyCdc20_2
0.0556
p.V169I
DO23708
LUAD
ICGC
RDSLYAE
LIG_APCC_ABBAyCdc20_2
0.0556
p.V169I
SIDM00602
Gastric Carcinoma
GDSC
RDSLYAE
LIG_APCC_ABBAyCdc20_2
0.0556
p.V169I
IM-95
stomach
COSMIC
RDSLYAE
LIG_APCC_ABBAyCdc20_2
0.0556
p.L163F
TCGA-A3-3313
KIRC
TCGA
RDSLYAE
LIG_APCC_ABBAyCdc20_2
0.2222
p.R152Q
TCGA-D7-6526
STAD
TCGA
RDSLYAE
LIG_APCC_ABBAyCdc20_2
0.3056
p.R152Q
DO38803
STAD
ICGC
RDSLYAE
LIG_APCC_ABBAyCdc20_2
0.3056
p.N147K
TCGA-EO-A22U
UCEC
TCGA
RDSLYAE
LIG_APCC_ABBAyCdc20_2
0.1667
p.N147K
DO43755
UCEC
ICGC
RDSLYAE
LIG_APCC_ABBAyCdc20_2
0.1667
p.N156S
TCGA-NH-A5IV
COAD
TCGA
RDSLYAE
LIG_APCC_ABBAyCdc20_2
0.7069
p.N156S
DO49095
COAD
ICGC
RDSLYAE
LIG_APCC_ABBAyCdc20_2
0.7069
p.H160N
DO229026
LICA
ICGC
RDSLYAE
LIG_APCC_ABBAyCdc20_2
0.3056
p.R157H
DO218866
SKCA
ICGC
RDSLYAE
LIG_APCC_ABBAyCdc20_2
0.8244
p.R157H
SIDM00789
Colorectal Carcinoma
GDSC
RDSLYAE
LIG_APCC_ABBAyCdc20_2
0.8244
p.R157H
HCT-15
large_intestine
COSMIC
RDSLYAE
LIG_APCC_ABBAyCdc20_2
0.8244
p.N147S
SIDM00943
Pancreatic Carcinoma
GDSC
RDSLYAE
LIG_APCC_ABBAyCdc20_2
0.1667
p.N147S
Capan-2
pancreas
COSMIC
RDSLYAE
LIG_APCC_ABBAyCdc20_2
0.1667
p.A167V
HCT-116
large_intestine
COSMIC
RDSLYAE
LIG_APCC_ABBAyCdc20_2
0.1111
p.S161F
MCC13
skin
COSMIC
RDSLYAE
LIG_APCC_ABBAyCdc20_2
0.2778
p.R149H
HCT-15
large_intestine
COSMIC
RDSLYAE
LIG_APCC_ABBAyCdc20_2
0.2222
p.V161I
IM-95
stomach
COSMIC
RDSLYAE
LIG_APCC_ABBAyCdc20_2
0.2778
Drug responses associated with RORA mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RDSLYAE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P35398
Nuclear receptor ROR-alpha
LIG_APCC_ABBAyCdc20_2
153:159
RDSLYAE
APC,CDC20,FZR1
0.8425
More...