DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RGGVHSE
Uniprot ID:
Q15784
Source protein:
Neurogenic differentiation factor 2
Source gene:
NEUROD2
Class:
LIG_APCC_ABBAyCdc20_2
Location:
350:356
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7332
ASA_SCORE:
73.6286
COIL:
0.7141
CONS_SCORE:
0.3818
DSS_SCORE:
0.2556
HELIX:
0.1481
FCONS_SCORE:
1.1655
RIG_SCORE:
0.6781
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S346L
TCGA-93-8067
LUAD
TCGA
RGGVHSE
LIG_APCC_ABBAyCdc20_2
0.2222
p.S346L
DO25113
LUAD
ICGC
RGGVHSE
LIG_APCC_ABBAyCdc20_2
0.2222
p.E356D
TCGA-CA-6717
COAD
TCGA
RGGVHSE
LIG_APCC_ABBAyCdc20_2
0.5647
p.E356D
DO8264
COAD
ICGC
RGGVHSE
LIG_APCC_ABBAyCdc20_2
0.5647
p.G351W
TCGA-D3-A2JN
SKCM
TCGA
RGGVHSE
LIG_APCC_ABBAyCdc20_2
0.6714
p.G351W
DO47590
SKCM
ICGC
RGGVHSE
LIG_APCC_ABBAyCdc20_2
0.6714
p.R350H
TCGA-HU-8602
STAD
TCGA
RGGVHSE
LIG_APCC_ABBAyCdc20_2
0.8244
p.R350H
DO222765
COCA
ICGC
RGGVHSE
LIG_APCC_ABBAyCdc20_2
0.8244
p.R350H
DO47829
STAD
ICGC
RGGVHSE
LIG_APCC_ABBAyCdc20_2
0.8244
p.G351R
DO233281
GACA
ICGC
RGGVHSE
LIG_APCC_ABBAyCdc20_2
0.6457
p.G345S
SIDM00333
Endometrial Carcinoma
GDSC
RGGVHSE
LIG_APCC_ABBAyCdc20_2
0.1944
p.G345S
ACH-000988
Endometrial/Uterine Cancer
CCLE
RGGVHSE
LIG_APCC_ABBAyCdc20_2
0.1944
p.G345S
MFE-319
endometrium
COSMIC
RGGVHSE
LIG_APCC_ABBAyCdc20_2
0.1944
p.G351V
SIDM01124
Non-Small Cell Lung Carcinoma
GDSC
RGGVHSE
LIG_APCC_ABBAyCdc20_2
0.6421
p.G351V
ACH-000945
Lung Cancer
CCLE
RGGVHSE
LIG_APCC_ABBAyCdc20_2
0.6421
p.G351V
NCI-H650
lung
COSMIC
RGGVHSE
LIG_APCC_ABBAyCdc20_2
0.6421
p.H364L
SIDM00497
Colorectal Carcinoma
GDSC
RGGVHSE
LIG_APCC_ABBAyCdc20_2
0.1111
p.H364L
ACH-000683
Colon/Colorectal Cancer
CCLE
RGGVHSE
LIG_APCC_ABBAyCdc20_2
0.1111
Drug responses associated with NEUROD2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RGGVHSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q15784
Neurogenic differentiation factor 2
LIG_APCC_ABBAyCdc20_2
350:356
RGGVHSE
APC,CDC20,FZR1
0.7332
More...