DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RTYVFPE
Uniprot ID:
Q13207
Source protein:
T-box transcription factor TBX2
Source gene:
TBX2
Class:
LIG_APCC_ABBAyCdc20_2
Location:
251:257
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5093
ASA_SCORE:
54.7571
COIL:
0.4204
CONS_SCORE:
0.8527
DSS_SCORE:
0.0425
HELIX:
0.0111
FCONS_SCORE:
1.0101
RIG_SCORE:
0.9085
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R251C
DO35442
PACA
ICGC
RTYVFPE
LIG_APCC_ABBAyCdc20_2
0.8301
p.R251H
DO52482
COCA
ICGC
RTYVFPE
LIG_APCC_ABBAyCdc20_2
0.8244
p.T252A
TCGA-AY-6197
COAD
TCGA
RTYVFPE
LIG_APCC_ABBAyCdc20_2
0.7139
p.T252A
DO9956
COAD
ICGC
RTYVFPE
LIG_APCC_ABBAyCdc20_2
0.7139
p.T252S
SIDM01954
Colorectal Carcinoma
GDSC
RTYVFPE
LIG_APCC_ABBAyCdc20_2
0.7116
p.V254L
DO228948
LICA
ICGC
RTYVFPE
LIG_APCC_ABBAyCdc20_2
0.5654
p.V254L
SIDM00588
Oral Cavity Carcinoma
GDSC
RTYVFPE
LIG_APCC_ABBAyCdc20_2
0.5654
p.V254L
SIDM00250
Esophageal Squamous Cell Carcinoma
GDSC
RTYVFPE
LIG_APCC_ABBAyCdc20_2
0.5654
p.V254L
TE-4
oesophagus
COSMIC
RTYVFPE
LIG_APCC_ABBAyCdc20_2
0.5654
p.V254L
HSC-4
upper_aerodigestive_tract
COSMIC
RTYVFPE
LIG_APCC_ABBAyCdc20_2
0.5654
p.A262V
TCGA-EY-A5W2
UCEC
TCGA
RTYVFPE
LIG_APCC_ABBAyCdc20_2
0.1944
p.A262V
DO48177
UCEC
ICGC
RTYVFPE
LIG_APCC_ABBAyCdc20_2
0.1944
p.D241G
TCGA-GC-A3RB
BLCA
TCGA
RTYVFPE
LIG_APCC_ABBAyCdc20_2
0.0556
p.D241G
DO530
BLCA
ICGC
RTYVFPE
LIG_APCC_ABBAyCdc20_2
0.0556
p.Q267H
TCGA-S5-A6DX
BLCA
TCGA
RTYVFPE
LIG_APCC_ABBAyCdc20_2
0.0556
p.Q267H
DO51903
BLCA
ICGC
RTYVFPE
LIG_APCC_ABBAyCdc20_2
0.0556
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Drug responses associated with TBX2 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of RTYVFPE
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13207
T-box transcription factor TBX2
LIG_APCC_ABBAyCdc20_2
251:257
RTYVFPE
APC,CDC20,FZR1
0.5093
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