DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
RTYVFPE
Uniprot ID:
Q13207
Source protein:
T-box transcription factor TBX2
Source gene:
TBX2
Class:
LIG_APCC_ABBAyCdc20_2
Location:
251:257
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5093
ASA_SCORE:
54.7571
COIL:
0.4204
CONS_SCORE:
0.8527
DSS_SCORE:
0.0425
HELIX:
0.0111
FCONS_SCORE:
1.0101
RIG_SCORE:
0.9085
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T252A
TCGA-AY-6197
COAD
TCGA
RTYVFPE
LIG_APCC_ABBAyCdc20_2
0.7139
p.T252A
DO9956
COAD
ICGC
RTYVFPE
LIG_APCC_ABBAyCdc20_2
0.7139
p.A262V
TCGA-EY-A5W2
UCEC
TCGA
RTYVFPE
LIG_APCC_ABBAyCdc20_2
0.1944
p.A262V
DO48177
UCEC
ICGC
RTYVFPE
LIG_APCC_ABBAyCdc20_2
0.1944
p.D241G
TCGA-GC-A3RB
BLCA
TCGA
RTYVFPE
LIG_APCC_ABBAyCdc20_2
0.0556
p.D241G
DO530
BLCA
ICGC
RTYVFPE
LIG_APCC_ABBAyCdc20_2
0.0556
p.Q267H
TCGA-S5-A6DX
BLCA
TCGA
RTYVFPE
LIG_APCC_ABBAyCdc20_2
0.0556
p.Q267H
DO51903
BLCA
ICGC
RTYVFPE
LIG_APCC_ABBAyCdc20_2
0.0556
p.R251H
DO52482
COCA
ICGC
RTYVFPE
LIG_APCC_ABBAyCdc20_2
0.8244
p.V254L
DO228948
LICA
ICGC
RTYVFPE
LIG_APCC_ABBAyCdc20_2
0.5654
p.V254L
SIDM00588
Oral Cavity Carcinoma
GDSC
RTYVFPE
LIG_APCC_ABBAyCdc20_2
0.5654
p.V254L
SIDM00250
Esophageal Squamous Cell Carcinoma
GDSC
RTYVFPE
LIG_APCC_ABBAyCdc20_2
0.5654
p.V254L
TE-4
oesophagus
COSMIC
RTYVFPE
LIG_APCC_ABBAyCdc20_2
0.5654
p.V254L
HSC-4
upper_aerodigestive_tract
COSMIC
RTYVFPE
LIG_APCC_ABBAyCdc20_2
0.5654
p.R251C
DO35442
PACA
ICGC
RTYVFPE
LIG_APCC_ABBAyCdc20_2
0.8301
p.T252S
SIDM01954
Colorectal Carcinoma
GDSC
RTYVFPE
LIG_APCC_ABBAyCdc20_2
0.7116
Drug responses associated with TBX2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RTYVFPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13207
T-box transcription factor TBX2
LIG_APCC_ABBAyCdc20_2
251:257
RTYVFPE
APC,CDC20,FZR1
0.5093
More...