DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RVGIFVD
Uniprot ID:
O15553
Source protein:
Pyrin
Source gene:
MEFV
Class:
LIG_APCC_ABBAyCdc20_2
Location:
717:723
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5956
ASA_SCORE:
17.9714
COIL:
0.0386
CONS_SCORE:
0.5801
DSS_SCORE:
0.0843
HELIX:
0.0017
FCONS_SCORE:
1.3301
RIG_SCORE:
0.8874
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G719V
TCGA-A8-A07U
BRCA
TCGA
RVGIFVD
LIG_APCC_ABBAyCdc20_2
0.6421
p.G727A
TCGA-DK-A1AC
BLCA
TCGA
RVGIFVD
LIG_APCC_ABBAyCdc20_2
0.2222
p.S730F
TCGA-FW-A3R5
SKCM
TCGA
RVGIFVD
LIG_APCC_ABBAyCdc20_2
0.1389
p.D723N
TCGA-GF-A3OT
SKCM
TCGA
RVGIFVD
LIG_APCC_ABBAyCdc20_2
0.6932
p.R708C
SIDM00461
Acute Myeloid Leukemia
GDSC
RVGIFVD
LIG_APCC_ABBAyCdc20_2
0.0833
p.R708C
OCI-AML5
haematopoietic_and_lymphoid_tissue
COSMIC
RVGIFVD
LIG_APCC_ABBAyCdc20_2
0.0833
p.R717C
SIDM00945
Colorectal Carcinoma
GDSC
RVGIFVD
LIG_APCC_ABBAyCdc20_2
0.8301
p.R717C
CL-34
large_intestine
COSMIC
RVGIFVD
LIG_APCC_ABBAyCdc20_2
0.8301
p.V726A
SIDM01120
Other Solid Cancers
GDSC
RVGIFVD
LIG_APCC_ABBAyCdc20_2
0.25
p.V726A
SIDM00941
Kidney Carcinoma
GDSC
RVGIFVD
LIG_APCC_ABBAyCdc20_2
0.25
p.V726A
SIDM00140
Melanoma
GDSC
RVGIFVD
LIG_APCC_ABBAyCdc20_2
0.25
p.F721Y
SIDM00893
Breast Carcinoma
GDSC
RVGIFVD
LIG_APCC_ABBAyCdc20_2
0.6417
p.F721Y
BT-20
breast
COSMIC
RVGIFVD
LIG_APCC_ABBAyCdc20_2
0.6417
p.R717P
SIDM00927
Small Cell Lung Carcinoma
GDSC
RVGIFVD
LIG_APCC_ABBAyCdc20_2
0.7512
p.R717P
NCI-H510A
lung
COSMIC
RVGIFVD
LIG_APCC_ABBAyCdc20_2
0.7512
p.D723E
ACH-000681
Lung Cancer
CCLE
RVGIFVD
LIG_APCC_ABBAyCdc20_2
0.5647
Drug responses associated with MEFV mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RVGIFVD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15553
Pyrin
LIG_APCC_ABBAyCdc20_2
717:723
RVGIFVD
APC,CDC20,FZR1
0.5956
More...