DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RVQLFKD
Uniprot ID:
Q9Y3Z3
Source protein:
Deoxynucleoside triphosphate triphosphohydrolase SAMHD1
Source gene:
SAMHD1
Class:
LIG_APCC_ABBAyCdc20_2
Location:
617:623
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9956
ASA_SCORE:
96.9
COIL:
0.7229
CONS_SCORE:
0.2377
DSS_SCORE:
0.7583
HELIX:
0.1301
FCONS_SCORE:
1.0449
RIG_SCORE:
0.7499
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R611Q
TCGA-AO-A128
BRCA
TCGA
RVQLFKD
LIG_APCC_ABBAyCdc20_2
0.1667
p.R611Q
DO5326
BRCA
ICGC
RVQLFKD
LIG_APCC_ABBAyCdc20_2
0.1667
p.R611Q
SIDM00845
Burkitt's Lymphoma
GDSC
RVQLFKD
LIG_APCC_ABBAyCdc20_2
0.1667
p.R611Q
SIDM01072
Squamous Cell Lung Carcinoma
GDSC
RVQLFKD
LIG_APCC_ABBAyCdc20_2
0.1667
p.T608A
TCGA-CD-A48C
STAD
TCGA
RVQLFKD
LIG_APCC_ABBAyCdc20_2
0.5278
p.T608A
DO47912
STAD
ICGC
RVQLFKD
LIG_APCC_ABBAyCdc20_2
0.5278
p.V618L
SIDM01048
Plasma Cell Myeloma
GDSC
RVQLFKD
LIG_APCC_ABBAyCdc20_2
0.5654
p.V618L
ACH-000821
Myeloma
CCLE
RVQLFKD
LIG_APCC_ABBAyCdc20_2
0.5654
p.V618L
EJM
haematopoietic_and_lymphoid_tissue
COSMIC
RVQLFKD
LIG_APCC_ABBAyCdc20_2
0.5654
p.L620P
ACH-000568
Breast Cancer
CCLE
RVQLFKD
LIG_APCC_ABBAyCdc20_2
0.7582
p.D624G
ACH-001786
Colon/Colorectal Cancer
CCLE
RVQLFKD
LIG_APCC_ABBAyCdc20_2
0.3056
Drug responses associated with SAMHD1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RVQLFKD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y3Z3
Deoxynucleoside triphosphate triphosphohydrolase SAMHD1
LIG_APCC_ABBAyCdc20_2
617:623
RVQLFKD
APC,CDC20,FZR1
0.9956
More...