DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
SEILSESVVPDV
Uniprot ID:
Q969G3
Source protein:
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Source gene:
SMARCE1
Class:
DEG_COP1_1
Location:
204:215
E3 ligase:
COP1
DEGRON score:
0.8576
ASA_SCORE:
64.925
COIL:
0.6273
CONS_SCORE:
0.6383
DSS_SCORE:
0.206
HELIX:
0.2648
FCONS_SCORE:
1.0013
RIG_SCORE:
0.7884
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I206L
TCGA-12-0775
GBM
TCGA
SEILSESVVPDV
DEG_COP1_1
0.6063
p.L207F
TCGA-2W-A8YY
CESC
TCGA
SEILSESVVPDV
DEG_COP1_1
0.587
p.Q197H
TCGA-86-7953
LUAD
TCGA
SEILSESVVPDV
DEG_COP1_1
0.1389
p.R201H
TCGA-AO-A128
BRCA
TCGA
SEILSESVVPDV
DEG_COP1_1
0.25
p.R216W
TCGA-AX-A0J0
UCEC
TCGA
SEILSESVVPDV
DEG_COP1_1
0.3056
p.R201C
TCGA-AZ-6598
COAD
TCGA
SEILSESVVPDV
DEG_COP1_1
0.25
p.S217L
TCGA-BH-A0HF
BRCA
TCGA
SEILSESVVPDV
DEG_COP1_1
0.2778
p.V215D
TCGA-CG-4442
STAD
TCGA
SEILSESVVPDV
DEG_COP1_1
0.7785
p.A194T
TCGA-FP-A8CX
STAD
TCGA
SEILSESVVPDV
DEG_COP1_1
0.0556
p.R195S
TCGA-GN-A262
SKCM
TCGA
SEILSESVVPDV
DEG_COP1_1
0.0833
p.E209Q
DO767
BLCA
ICGC
SEILSESVVPDV
DEG_COP1_1
0.5633
p.E209Q
SIDM00983
Bladder Carcinoma
GDSC
SEILSESVVPDV
DEG_COP1_1
0.5633
p.E209Q
ACH-000896
Bladder Cancer
CCLE
SEILSESVVPDV
DEG_COP1_1
0.5633
p.E209Q
647-V
urinary_tract
COSMIC
SEILSESVVPDV
DEG_COP1_1
0.5633
p.S199L
DO1749
BRCA
ICGC
SEILSESVVPDV
DEG_COP1_1
0.1944
p.L210I
DO229027
LICA
ICGC
SEILSESVVPDV
DEG_COP1_1
0.7174
p.V196G
DO229485
SKCA
ICGC
SEILSESVVPDV
DEG_COP1_1
0.1111
p.V197D
DO38380
STAD
ICGC
SEILSESVVPDV
DEG_COP1_1
0.1389
p.L211I
DO41572
UCEC
ICGC
SEILSESVVPDV
DEG_COP1_1
0.7174
p.R216G
SIDM01063
Acute Myeloid Leukemia
GDSC
SEILSESVVPDV
DEG_COP1_1
0.3056
p.V218A
ACH-001719
Ovarian Cancer
CCLE
SEILSESVVPDV
DEG_COP1_1
0.25
p.R198L
HD-MY-Z
haematopoietic_and_lymphoid_tissue
COSMIC
SEILSESVVPDV
DEG_COP1_1
0.1667
p.R216L
HD-MY-Z
haematopoietic_and_lymphoid_tissue
COSMIC
SEILSESVVPDV
DEG_COP1_1
0.3056
Drug responses associated with SMARCE1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SEILSESVVPDV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q969G3
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
DEG_COP1_1
204:215
SEILSESVVPDV
COP1
0.8576
More...