DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SEPMAVPDL
Uniprot ID:
Q86XK7
Source protein:
V-set and immunoglobulin domain-containing protein 1
Source gene:
VSIG1
Class:
DEG_COP1_1
Location:
336:344
E3 ligase:
COP1
DEGRON score:
0.8258
ASA_SCORE:
82.6778
COIL:
0.9129
CONS_SCORE:
0.2867
DSS_SCORE:
0.9124
HELIX:
0.0436
FCONS_SCORE:
0.8323
RIG_SCORE:
0.615
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T350A
TCGA-A8-A08A
BRCA
TCGA
SEPMAVPDL
DEG_COP1_1
0.1667
p.T350A
DO2599
BRCA
ICGC
SEPMAVPDL
DEG_COP1_1
0.1667
p.D331Y
TCGA-AX-A05Z
UCEC
TCGA
SEPMAVPDL
DEG_COP1_1
0.1944
p.T346N
TCGA-OR-A5JA
ACC
TCGA
SEPMAVPDL
DEG_COP1_1
0.2778
p.P334R
DO28265
OV
ICGC
SEPMAVPDL
DEG_COP1_1
0.2778
p.L348Q
ACH-000943
Colon/Colorectal Cancer
CCLE
SEPMAVPDL
DEG_COP1_1
0.2222
p.L348Q
RKO
large_intestine
COSMIC
SEPMAVPDL
DEG_COP1_1
0.2222
p.A333D
ACH-001623
Brain Cancer
CCLE
SEPMAVPDL
DEG_COP1_1
0.25
Drug responses associated with VSIG1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SEPMAVPDL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86XK7
V-set and immunoglobulin domain-containing protein 1
DEG_COP1_1
336:344
SEPMAVPDL
COP1
0.8258
More...