DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SLPEYPTVPSY
Uniprot ID:
Q969E2
Source protein:
Secretory carrier-associated membrane protein 4
Source gene:
SCAMP4
Class:
DEG_COP1_1
Location:
212:222
E3 ligase:
COP1
DEGRON score:
0.942
ASA_SCORE:
83.3455
COIL:
0.9408
CONS_SCORE:
0.262
DSS_SCORE:
0.5316
HELIX:
0.0185
FCONS_SCORE:
1.029
RIG_SCORE:
0.6611
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S209L
TCGA-AC-A6IW
BRCA
TCGA
SLPEYPTVPSY
DEG_COP1_1
0.25
p.S209L
DO50028
BRCA
ICGC
SLPEYPTVPSY
DEG_COP1_1
0.25
p.E202Q
TCGA-CC-A9FS
LIHC
TCGA
SLPEYPTVPSY
DEG_COP1_1
0.0556
p.E202Q
DO219553
LIHC
ICGC
SLPEYPTVPSY
DEG_COP1_1
0.0556
p.F208L
TCGA-DK-A6AW
BLCA
TCGA
SLPEYPTVPSY
DEG_COP1_1
0.2222
p.F208L
DO48566
BLCA
ICGC
SLPEYPTVPSY
DEG_COP1_1
0.2222
p.P223L
SIDM01016
T-Lymphoblastic Leukemia
GDSC
SLPEYPTVPSY
DEG_COP1_1
0.3056
p.P223L
SIDM00946
T-Lymphoblastic Leukemia
GDSC
SLPEYPTVPSY
DEG_COP1_1
0.3056
p.P223L
SIDM01263
T-Lymphoblastic Leukemia
GDSC
SLPEYPTVPSY
DEG_COP1_1
0.3056
p.P223L
ACH-000981
Leukemia
CCLE
SLPEYPTVPSY
DEG_COP1_1
0.3056
p.P223L
ACH-000995
Leukemia
CCLE
SLPEYPTVPSY
DEG_COP1_1
0.3056
p.P223L
DND-41
haematopoietic_and_lymphoid_tissue
COSMIC
SLPEYPTVPSY
DEG_COP1_1
0.3056
p.P223L
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
SLPEYPTVPSY
DEG_COP1_1
0.3056
Drug responses associated with SCAMP4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SLPEYPTVPSY
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q969E2
Secretory carrier-associated membrane protein 4
DEG_COP1_1
212:222
SLPEYPTVPSY
COP1
0.942
More...